Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M11
         (438 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   4.8  
AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14...    23   6.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   8.3  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 260 SRRNVWPNASQLRLIT 307
           SRRN W N S   LIT
Sbjct: 111 SRRNAWGNLSYADLIT 126


>AF117748-1|AAD38334.1|  365|Anopheles gambiae serine protease 14A
           protein.
          Length = 365

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 92  RILDARLGPRRRGTSPSVSPGFPGTFADP 6
           R+++ RLG     T    + G P   ADP
Sbjct: 170 RLVNVRLGEYNTATDTDCADGNPDDCADP 198


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 75  LGT*TAGNFTVSQSRISWHLCG 10
           LGT T  N    +S +S  +CG
Sbjct: 546 LGTATGNNIAAMESLVSGFVCG 567


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,870
Number of Sequences: 2352
Number of extensions: 6707
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)