Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M11
(438 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 132 2e-31
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 132 2e-31
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 132 2e-31
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 132 2e-31
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 132 2e-31
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 132 2e-31
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 132 2e-31
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 132 2e-31
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 32 5e-04
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 32 5e-04
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 32 5e-04
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 32 5e-04
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 32 5e-04
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 32 5e-04
AY058249-1|AAL13478.1| 317|Drosophila melanogaster GH01265p pro... 29 2.1
AF216752-1|AAF25955.1| 317|Drosophila melanogaster BOK protein. 29 2.1
AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p pro... 29 2.8
AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA... 29 2.8
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 6.4
BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p pro... 27 8.4
AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-P... 27 8.4
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 91 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 147
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 148 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 91 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 147
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 148 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 125 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 181
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 182 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 230
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 132 bits (320), Expect = 2e-31
Identities = 69/109 (63%), Positives = 77/109 (70%)
Frame = +1
Query: 31 PGLTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPKIQ 210
PGLTD +PRRLGPKRASKIRKL+NL KEDDVRR+VV+R LPA K+N K KAPKIQ
Sbjct: 122 PGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQ 178
Query: 211 RLVTPVVLQXXXXXXXXXXXXXXXXXSAEADYAKLLAQRKKESKVRRQE 357
RL+TPVVLQ A ADYAKLL QRKKESK +R+E
Sbjct: 179 RLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 163 AIAEYVKLLVKRKKESKANR 182
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 68 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 110
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 112 AIAEYVKLLVKRKKESKANR 131
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 110 AIAEYVKLLVKRKKESKANR 129
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 31.9 bits (69), Expect(2) = 5e-04
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 55 PRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKENAKPRYKAPK 204
P RLGP R+S I K++ L +EDD ++P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 29.1 bits (62), Expect(2) = 5e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 292 AEADYAKLLAQRKKESKVRR 351
A A+Y KLL +RKKESK R
Sbjct: 98 AIAEYVKLLVKRKKESKANR 117
>AY058249-1|AAL13478.1| 317|Drosophila melanogaster GH01265p
protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 7 GSAKVPGNPGLTDGEVPRRLGPKRASKI--RKLFNLKKEDDVRRYVVKRLLPAK 162
G A++ G PGL R +GP A R+++ L D VR Y+ +R+ K
Sbjct: 232 GLAEIIGRPGLLADRQRRMVGPVAAHPTPGRRIYVLGMVDAVRDYLCRRIYGLK 285
>AF216752-1|AAF25955.1| 317|Drosophila melanogaster BOK protein.
Length = 317
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 7 GSAKVPGNPGLTDGEVPRRLGPKRASKI--RKLFNLKKEDDVRRYVVKRLLPAK 162
G A++ G PGL R +GP A R+++ L D VR Y+ +R+ K
Sbjct: 232 GLAEIIGRPGLLADRQRRMVGPVAAHPTPGRRIYVLGMVDAVRDYLCRRIYGLK 285
>AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p
protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 ASKIRKLFNL-KKEDDVRRYVVKRLLPAKEGKEN 177
+ KIRK F++ K D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA
protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 79 ASKIRKLFNL-KKEDDVRRYVVKRLLPAKEGKEN 177
+ KIRK F++ K D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 114 RRRCASLCCKTPFTCQRGQGKCKTQIQGA*NPE 212
+ RC + C TC R GKC + NP+
Sbjct: 1312 KERCEGVVCGIGATCDRNNGKCICEPNFVGNPD 1344
>BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p
protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 37 LTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKE 174
L D E P+ P+R + + + + + EDDV V K L + KE
Sbjct: 225 LEDAERPKIAPPQRKKEKKAVSDNESEDDVENVVEKDALKEESTKE 270
>AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-PA
protein.
Length = 949
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 37 LTDGEVPRRLGPKRASKIRKLFNLKKEDDVRRYVVKRLLPAKEGKE 174
L D E P+ P+R + + + + + EDDV V K L + KE
Sbjct: 225 LEDAERPKIAPPQRKKEKKAVSDNESEDDVENVVEKDALKEESTKE 270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,577,532
Number of Sequences: 53049
Number of extensions: 287908
Number of successful extensions: 883
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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