Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M10
(441 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 264 5e-71
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 264 5e-71
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 264 5e-71
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 264 5e-71
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 264 5e-71
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 260 8e-70
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 198 3e-51
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 198 3e-51
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 184 4e-47
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 184 4e-47
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 50 2e-06
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 50 2e-06
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 48 7e-06
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 48 7e-06
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.2
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 30 1.6
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 30 1.6
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 264 bits (646), Expect = 5e-71
Identities = 119/141 (84%), Positives = 132/141 (93%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
IPGLTD +PRRLGPKRASKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKI 141
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 264 bits (646), Expect = 5e-71
Identities = 119/141 (84%), Positives = 132/141 (93%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
IPGLTD +PRRLGPKRASKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKI 141
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 264 bits (646), Expect = 5e-71
Identities = 119/141 (84%), Positives = 132/141 (93%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
IPGLTD +PRRLGPKRASKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKI 141
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 264 bits (646), Expect = 5e-71
Identities = 119/141 (84%), Positives = 132/141 (93%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
IPGLTD +PRRLGPKRASKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKI 141
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 264 bits (646), Expect = 5e-71
Identities = 119/141 (84%), Positives = 132/141 (93%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
IPGLTD +PRRLGPKRASKI
Sbjct: 121 IPGLTDTTIPRRLGPKRASKI 141
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 260 bits (636), Expect = 8e-70
Identities = 117/139 (84%), Positives = 130/139 (93%)
Frame = +3
Query: 24 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 203
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 204 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 383
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 384 GLTDGEVPRRLGPKRASKI 440
GLTD +PRRLGPKRASKI
Sbjct: 126 GLTDTTIPRRLGPKRASKI 144
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 198 bits (483), Expect = 3e-51
Identities = 89/110 (80%), Positives = 101/110 (91%)
Frame = +3
Query: 111 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 290
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 291 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKI 440
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKI
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKI 110
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 198 bits (483), Expect = 3e-51
Identities = 89/110 (80%), Positives = 101/110 (91%)
Frame = +3
Query: 111 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 290
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 291 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKI 440
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKI
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKI 110
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 184 bits (449), Expect = 4e-47
Identities = 93/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 119 ---------PCRLGPVRSSNI 130
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 184 bits (449), Expect = 4e-47
Identities = 93/141 (65%), Positives = 108/141 (76%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 198 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 377
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 378 IPGLTDGEVPRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 119 ---------PCRLGPVRSSNI 130
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +3
Query: 225 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 404
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 405 PRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 54 PCRLGPVRSSNI 65
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +3
Query: 225 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 404
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 405 PRRLGPKRASKI 440
P RLGP R+S I
Sbjct: 54 PCRLGPVRSSNI 65
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 47.6 bits (108), Expect = 7e-06
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +3
Query: 231 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 410
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 411 RLGPKRASKI 440
RLGP R+S I
Sbjct: 70 RLGPVRSSNI 79
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 47.6 bits (108), Expect = 7e-06
Identities = 31/70 (44%), Positives = 41/70 (58%)
Frame = +3
Query: 231 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 410
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 411 RLGPKRASKI 440
RLGP R+S I
Sbjct: 68 RLGPVRSSNI 77
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 195 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 64
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 273 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 422
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 273 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 422
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,964,532
Number of Sequences: 53049
Number of extensions: 415455
Number of successful extensions: 1019
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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