Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M06
         (333 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   0.48 
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   3.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   7.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 0.48
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 263 YLLSVYDEVSIYGLNGTLETTVSRIILEKVDHVVKTNER 147
           YL+  Y  +   G+      T + +IL++V+HV K  E+
Sbjct: 156 YLIFSYCPIVTTGIIKIQFATCAHLILQRVNHVKKILEK 194


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 165 YMVYLFQYDSTHG 203
           ++V LFQY   HG
Sbjct: 378 FLVILFQYGGIHG 390


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 35  YSYHNHVENRN*RFWSHRS 91
           + YH +V N    FW   S
Sbjct: 163 FRYHFNVHNSGTHFWHSHS 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,074
Number of Sequences: 336
Number of extensions: 1411
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)