Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M06
(333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 127 2e-30
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 127 2e-30
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 127 2e-30
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 124 2e-29
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 119 4e-28
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 119 4e-28
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 119 4e-28
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 119 4e-28
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 119 4e-28
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 32 0.11
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 29 1.1
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 27 4.3
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 27 4.3
U53335-8|AAA96173.1| 606|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 26 5.7
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 26 5.7
AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical ... 26 7.5
AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical ... 26 7.5
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 26 7.5
U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical pr... 25 10.0
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 127 bits (306), Expect = 2e-30
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 236
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 237 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
+L+V GK KI V++ RDP I WG +GA+YVVE
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVE 102
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 127 bits (306), Expect = 2e-30
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 236
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 237 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
+L+V GK KI V++ RDP I WG +GA+YVVE
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVE 102
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 127 bits (306), Expect = 2e-30
Identities = 63/97 (64%), Positives = 77/97 (79%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 236
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 237 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
+L+V GK KI V++ RDP I WG +GA+YVVE
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVE 102
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 124 bits (299), Expect = 2e-29
Identities = 62/97 (63%), Positives = 76/97 (78%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 236
+GINGFGRIGRLVLRA+++K + +V A+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 237 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
+L+V GK KI V++ RDP I WG +GA+YVVE
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVE 102
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 119 bits (287), Expect = 4e-28
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
Frame = +3
Query: 54 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 230
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 231 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
L+V +GK KI VF+ +DP AI WG A++VVE
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVE 102
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 119 bits (287), Expect = 4e-28
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
Frame = +3
Query: 54 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 230
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 231 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
L+V +GK KI VF+ +DP AI WG A++VVE
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVE 102
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 119 bits (287), Expect = 4e-28
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
Frame = +3
Query: 54 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 230
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 231 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
L+V +GK KI VF+ +DP AI WG A++VVE
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVE 102
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 119 bits (287), Expect = 4e-28
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
Frame = +3
Query: 54 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 230
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 231 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
L+V +GK KI VF+ +DP AI WG A++VVE
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVE 102
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 119 bits (287), Expect = 4e-28
Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
Frame = +3
Query: 54 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 230
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 231 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVE 332
L+V +GK KI VF+ +DP AI WG A++VVE
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVE 102
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -2
Query: 308 LTPWNSMGIPLREHSYLLSVYDEVSIYG-LNGTLETTVSRIILEKVDHVVK-TNERIIDS 135
L + + P L VY+ + Y ++ TLETT+ I + +D+V+K +++
Sbjct: 242 LFEFEKLNNPQNSFPLLYPVYETIQEYSKISETLETTILSGIQKNIDNVIKIAKSAKLNA 301
Query: 134 NNIGTLINR--STEHQATDATKTVNSDFRHD 48
++ L N S ++T A+K + F D
Sbjct: 302 ESVEQLSNMLLSRHSKSTKASKHITGFFNGD 332
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 177 LFQYDSTHGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAG 314
L+QY+ H R+K T+E + L+ G +A+F+ D + W G
Sbjct: 496 LYQYNF-HERYK-TLETILYILIAAGPSVAIFTMNDRTGLEWMMTG 539
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 157 PMKGSLIATTSAPLSIEARSTRRP-MRPKPLIPIFDMI 47
PM S T ++ S+E+ T+R R P+ P FD+I
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVI 206
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 157 PMKGSLIATTSAPLSIEARSTRRP-MRPKPLIPIFDMI 47
PM S T ++ S+E+ T+R R P+ P FD+I
Sbjct: 169 PMPASPCTTAASAPSVESTPTKRKRQRRNPVWPYFDVI 206
>U53335-8|AAA96173.1| 606|Caenorhabditis elegans Hypothetical
protein C55C3.1 protein.
Length = 606
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -2
Query: 212 LETTVSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDAT 78
L + R+IL V+H++ +N+ II + + R EH ++T
Sbjct: 67 LADQLPRLILPDVEHILPSNQGIIYISKVHLSRFRRAEHHQLNST 111
>Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical
protein T26H2.5 protein.
Length = 229
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -2
Query: 185 LEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVNSDFRHDYGKSIFS 27
LE V +++N S+ I ++ +T H A+ T+TV F + K + S
Sbjct: 13 LELVPPELRSNFENKSSSIIPLYLSSNTSHSASSYTRTVYVTFHKTFEKKVVS 65
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 287 GIPLREHSYLLSVYDEVSIYGLNGT 213
G+P EH+ L++ +D +SI G + T
Sbjct: 245 GLPRHEHAVLITKFDLISINGNSAT 269
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 287 GIPLREHSYLLSVYDEVSIYGLNGT 213
G+P EH+ L++ +D +SI G + T
Sbjct: 245 GLPRHEHAVLITKFDLISINGNSAT 269
>AF043698-4|AAB97560.1| 275|Caenorhabditis elegans Hypothetical
protein C54G6.1a protein.
Length = 275
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 200 VSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVNSDF 57
+ R I EK+D V + + + T N +H+ T AT + DF
Sbjct: 227 ILREISEKIDKVTTSQSPGFLAEYLATCCNEVVKHRETLATAGLGDDF 274
>AF043698-3|AAK68268.1| 268|Caenorhabditis elegans Hypothetical
protein C54G6.1b protein.
Length = 268
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 200 VSRIILEKVDHVVKTNERIIDSNNIGTLINRSTEHQATDATKTVNSDF 57
+ R I EK+D V + + + T N +H+ T AT + DF
Sbjct: 220 ILREISEKIDKVTTSQSPGFLAEYLATCCNEVVKHRETLATAGLGDDF 267
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 90 RLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFK 212
R++L + I G +++ +ND F DYM + Q + H R K
Sbjct: 267 RMLLDSYIKTGEIEIITLNDHFWRADYMWHNGQINDCHHRSK 308
>U40061-1|AAA81148.2| 573|Caenorhabditis elegans Hypothetical
protein ZK563.2 protein.
Length = 573
Score = 25.4 bits (53), Expect = 10.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 329 NNVFSTSLTPWNSMGIPLREHSYLLSVYDEV--SIYGLNGTLETTVSRIILEKVDHV 165
N++FS+SLTP G+ E Y L + + + G+ T SR EK H+
Sbjct: 348 NSIFSSSLTPLVGSGVVTLEQMYPLVLGSNIGTTFSGVLAAFSTDPSR--FEKALHM 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,501,730
Number of Sequences: 27780
Number of extensions: 141186
Number of successful extensions: 549
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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