Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M05
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   6.6  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   8.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 406 HFYEVQNKKYPP 441
           HFY + N  YPP
Sbjct: 230 HFYFMLNHNYPP 241


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 406 HFYEVQNKKYPP 441
           HFY + N  YPP
Sbjct: 230 HFYFMLNHNYPP 241


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 165 HKLLHKLRRSEL**RVEGVKRIFKKKTN 248
           H+L  K R SE   +  G+KRIF    N
Sbjct: 140 HQLPLKQRSSEFCGKNIGMKRIFTSSQN 167


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 348 NYCSSFEKKNNPSHCE 301
           NY ++FE  N  SH E
Sbjct: 41  NYINNFETSNGISHQE 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,033
Number of Sequences: 438
Number of extensions: 3224
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)