Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M03
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.6  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   8.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.6  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 126 QHYHVHQDAYGA 91
           +H H HQ  YGA
Sbjct: 19  EHPHQHQQHYGA 30


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 247 TNCGLWSLSRQ 279
           T+C LW++ RQ
Sbjct: 184 TDCQLWAIDRQ 194


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 9   EDVNMATSKKKTRKLR 56
           ED+++ T ++K  KLR
Sbjct: 226 EDISLTTHQQKRHKLR 241


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -1

Query: 132 HHQHYHV 112
           H+QHYH+
Sbjct: 7   HYQHYHI 13


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,271
Number of Sequences: 438
Number of extensions: 1929
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)