Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M02
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    25   0.49 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.6  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.1  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 16/78 (20%), Positives = 27/78 (34%)
 Frame = +1

Query: 28  VQHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMT 207
           + H     +    ++ N  P   + P        H N    +     +P  K      ++
Sbjct: 14  IDHNSCSSDDTVLSVGNENPPPEDTPLSFKNIESHLNAISQITNSTLDPGRKSPSSPRIS 73

Query: 208 DPETGKSKGYGFLTFHHA 261
            P + KS   GFLT+  A
Sbjct: 74  SPSSTKSGSPGFLTYTKA 91


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
 Frame = +2

Query: 245 LHSIMQRMLRKQWNN*TVSNWQDDL-------*K*VM*RNGQMVGLALALMRMSWTEQAS 403
           +HSI      + W+N TV +W  ++        K     +  +VG+    +R+    Q +
Sbjct: 255 VHSITHNDDERFWSNATVDDWAKEMAGMRIIAEKFANLTDNSVVGVRAPYLRVGGNNQFT 314

Query: 404 ILERQA 421
           ++E QA
Sbjct: 315 MMEEQA 320


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 261 CMMECKKSISFTFARLRVSH 202
           C +EC   +SF     RVSH
Sbjct: 504 CGVECSDKVSFFLHIARVSH 523


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 146 SVILK*SEPTYNLVGPLLVFGAKFGSVLPTLFF 48
           S ++K    T+ +V  LL+FG  F  ++ T+FF
Sbjct: 513 SKLVKLFNETFGIV-LLLMFGVSFVVIVITIFF 544


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 146 SVILK*SEPTYNLVGPLLVFGAKFGSVLPTLFF 48
           S ++K    T+ +V  LL+FG  F  ++ T+FF
Sbjct: 238 SKLVKLFNETFGIV-LLLMFGVSFVVIVITIFF 269


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 245 RNPYPLLLPVSGS 207
           R+PYP  LP+S S
Sbjct: 203 RSPYPSALPISTS 215


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 245 RNPYPLLLPVSGS 207
           R+PYP  LP+S S
Sbjct: 95  RSPYPSALPISTS 107


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/46 (21%), Positives = 24/46 (52%)
 Frame = +3

Query: 30   STYASGKEQSRQHAAKLSTKN**WTYQIVCRFASF*YYRRYASRHI 167
            S ++S      QH+   S  +    +++VC F ++ +YR+   +++
Sbjct: 1798 SVHSSTVVPPPQHSTTQSLVDPKSEFKVVCYFTNWAWYRQGVGKYL 1843



 Score = 21.0 bits (42), Expect = 6.1
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 105  YQIVCRFASF*YYRRYASRHI 167
            Y++VC F ++ +YR+   +++
Sbjct: 2321 YKVVCYFTNWAWYRQGDGKYL 2341



 Score = 20.6 bits (41), Expect = 8.0
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 105  YQIVCRFASF*YYRRYASRHI 167
            ++IVC F ++ +YR+   +++
Sbjct: 1398 FKIVCYFTNWAWYRKGLGKYL 1418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.136    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,317
Number of Sequences: 336
Number of extensions: 2917
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)