Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M02
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 111 4e-25
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 111 4e-25
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 71 5e-13
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 71 6e-13
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 71 6e-13
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 71 6e-13
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 63 9e-11
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 62 2e-10
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 62 2e-10
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 62 2e-10
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 62 3e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 61 4e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 61 4e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 61 4e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 61 4e-10
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 61 5e-10
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 61 5e-10
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 60 6e-10
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 59 2e-09
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 57 6e-09
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 57 6e-09
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 57 6e-09
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 57 6e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 56 2e-08
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 55 2e-08
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 55 2e-08
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 55 2e-08
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 55 3e-08
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 54 4e-08
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 54 4e-08
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 54 4e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 54 4e-08
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 54 7e-08
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 53 1e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 52 3e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 50 9e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 50 9e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 47 6e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 47 6e-06
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 46 1e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 46 1e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 1e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 1e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 45 3e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 3e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 3e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 3e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 3e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 44 5e-05
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 44 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 6e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 6e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 6e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 6e-05
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 44 6e-05
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 44 6e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 6e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 42 2e-04
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 42 2e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 41 4e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 6e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 6e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 6e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 6e-04
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 40 0.001
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 40 0.001
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 39 0.002
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 39 0.002
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 39 0.002
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 39 0.002
AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical ... 39 0.002
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.002
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.002
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 39 0.002
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 38 0.004
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.009
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 36 0.012
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 36 0.012
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 36 0.012
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 36 0.016
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 35 0.028
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 35 0.028
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 35 0.028
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 32 0.20
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 32 0.26
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 32 0.26
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 32 0.26
Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical pr... 31 0.34
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 31 0.34
AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 31 0.60
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 30 1.0
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 30 1.0
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 1.4
Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical pr... 29 1.8
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 29 1.8
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 4.2
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 27 7.4
AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical ... 27 9.8
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 27 9.8
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 111 bits (266), Expect = 4e-25
Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 12/164 (7%)
Frame = +1
Query: 4 RGLGVPIIVQHTQAEKNRVGN-----TLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIF 168
R +G P+ +Q T AE+NR N TL +AP + GPT + V +LH I E M+R IF
Sbjct: 89 RLMGAPLQIQRTCAERNRAANSSVASTLGFVAPG-NKGPTHVLVENLHPKIDEKMIRDIF 147
Query: 169 EPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTE-- 342
E FG+I+ I L D +++G+ +TF +A DA+K+ EQLN FELAGR +++ E
Sbjct: 148 ESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRLSIKQESQ 206
Query: 343 ----RTDGGSSTRFDADEL-DRAGIDLGATGRLQLMFKLAEGTG 459
+ + S + D++ DR G LGA GR QLM KLA+GTG
Sbjct: 207 APAVKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTG 250
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 154 LRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGN 333
L F G + ++++TD TG+SKG ++ F + LNG L G P+++
Sbjct: 41 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQR 99
Query: 334 V-TERTDGGSST 366
ER +S+
Sbjct: 100 TCAERNRAANSS 111
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 111 bits (266), Expect = 4e-25
Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 12/164 (7%)
Frame = +1
Query: 4 RGLGVPIIVQHTQAEKNRVGN-----TLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIF 168
R +G P+ +Q T AE+NR N TL +AP + GPT + V +LH I E M+R IF
Sbjct: 234 RLMGAPLQIQRTCAERNRAANSSVASTLGFVAPG-NKGPTHVLVENLHPKIDEKMIRDIF 292
Query: 169 EPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTE-- 342
E FG+I+ I L D +++G+ +TF +A DA+K+ EQLN FELAGR +++ E
Sbjct: 293 ESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQLNNFELAGRCIRLSIKQESQ 351
Query: 343 ----RTDGGSSTRFDADEL-DRAGIDLGATGRLQLMFKLAEGTG 459
+ + S + D++ DR G LGA GR QLM KLA+GTG
Sbjct: 352 APAVKKEEASIHQRSLDDVGDRQGFSLGAGGRQQLMAKLAQGTG 395
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 154 LRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGN 333
L F G + ++++TD TG+SKG ++ F + LNG L G P+++
Sbjct: 186 LEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL-ALNGQRLMGAPLQIQR 244
Query: 334 V-TERTDGGSST 366
ER +S+
Sbjct: 245 TCAERNRAANSS 256
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 70.9 bits (166), Expect = 5e-13
Identities = 30/72 (41%), Positives = 50/72 (69%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG++ ++++ED +R IF G + I+++ D ETGK KGYGF+ F A+ A+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 292 NGFELAGRPMKV 327
NG+EL+GR ++V
Sbjct: 80 NGYELSGRILRV 91
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 70.5 bits (165), Expect = 6e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+R+YVGS+ F I EDMLR F+PFG I I + DP TG K + F+ + A A E
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 286 QLNGFELAGRPMKVGNV 336
+NG L GR +KV ++
Sbjct: 162 SMNGQMLGGRNLKVNSM 178
Score = 53.6 bits (123), Expect = 7e-08
Identities = 24/72 (33%), Positives = 44/72 (61%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+YV S+H +++E L+ +FE FG+I QL P +G+G+L F++ +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 289 LNGFELAGRPMK 324
+N F+L G+ ++
Sbjct: 268 MNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 70.5 bits (165), Expect = 6e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+R+YVGS+ F I EDMLR F+PFG I I + DP TG K + F+ + A A E
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 286 QLNGFELAGRPMKVGNV 336
+NG L GR +KV ++
Sbjct: 162 SMNGQMLGGRNLKVNSM 178
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+YV S+H +++E L+ +FE FG+I QL P +G+G+L F++ +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 289 LNGFELAGRPMKVGNVTERTD 351
+N F+L G+ ++VG D
Sbjct: 268 MNMFDLGGQYLRVGKCVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 70.5 bits (165), Expect = 6e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+R+YVGS+ F I EDMLR F+PFG I I + DP TG K + F+ + A A E
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 286 QLNGFELAGRPMKVGNV 336
+NG L GR +KV ++
Sbjct: 162 SMNGQMLGGRNLKVNSM 178
Score = 58.0 bits (134), Expect = 3e-09
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+YV S+H +++E L+ +FE FG+I QL P +G+G+L F++ +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 289 LNGFELAGRPMKVGNVTERTD 351
+N F+L G+ ++VG D
Sbjct: 268 MNMFDLGGQYLRVGKCVTPPD 288
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
+G +YVG+ F TE+ L F G+I++++++ D ETG+ +G+ F+ F A++
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 277 AMEQLNGFELAGRPMKV 327
A+EQ+NG E GRP++V
Sbjct: 62 AVEQMNGAEFNGRPLRV 78
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 63.3 bits (147), Expect = 9e-11
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+YVG+ F TED L F G + +++++ D ETG+ +G+ F+ F A A++A++Q
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 292 NGFELAGRPMKVGNVTERTD 351
NG + GR ++V R +
Sbjct: 66 NGVDFNGRALRVNLAQNRNN 85
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = +1
Query: 13 GVPIIVQHTQAEKNRVGNTLPNLAPKTSNGPT---RLYVGSLHFNITEDMLRGIFEPFGK 183
G P++ + T P+ P TS+GP RL+V ++ F + L+ +FE FG
Sbjct: 121 GQPVVATTAGSTNGSAAVTQPD--PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGV 178
Query: 184 IDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTER 345
+ ++++ + E G SKG+GF+T DA++A ++L+G + GR ++V T R
Sbjct: 179 VSDVEIIFN-ERG-SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = +1
Query: 13 GVPIIVQHTQAEKNRVGNTLPNLAPKTSNGPT---RLYVGSLHFNITEDMLRGIFEPFGK 183
G P++ + T P+ P TS+GP RL+V ++ F + L+ +FE FG
Sbjct: 121 GQPVVATTAGSTNGSAAVTQPD--PSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGV 178
Query: 184 IDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTER 345
+ ++++ + E G SKG+GF+T DA++A ++L+G + GR ++V T R
Sbjct: 179 VSDVEIIFN-ERG-SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATAR 230
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 62.1 bits (144), Expect = 2e-10
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+YVG + ++ ED L +FE GKI ++LM DP +G S+GY F+T+ + DA A +
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 292 NGFELA-GRPMKV 327
+G E++ G+P+KV
Sbjct: 262 DGHEISTGKPLKV 274
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LY+ ++ +TE+ L +F+ + +D ++ K K Y F+ F+ D KAME+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVK--------KVKDYAFIHFNERDDCLKAMEEW 430
Query: 292 NGFELAG 312
NG EL G
Sbjct: 431 NGKELEG 437
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 61.7 bits (143), Expect = 3e-10
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N LYVG ++TE +L F PFG + I + D E+GK +G+GF+ F A DA
Sbjct: 8 NRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAM 67
Query: 277 AMEQLNGFELAGRPMKV 327
A++ +N EL G+ ++V
Sbjct: 68 AIDNMNESELFGKTIRV 84
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG L + LR F+PFG + +++ D T KSKGYGF+++ +A++A+EQ+
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 292 NGFELAGRPMKVGNVTER 345
NG L R ++ T +
Sbjct: 84 NGQWLGRRTIRTNWATRK 101
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+TS T +YVG++ ++TED +R F FG+I +++ K +GY F+ F +
Sbjct: 122 QTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDA 174
Query: 268 AKKAMEQLNGFELAGRPM-----KVGNVTERTDGGS 360
A KA+ Q+N ++ G+ + K G+ T +T GGS
Sbjct: 175 AAKAIVQMNNQDVGGQLVRCSWGKTGD-TGKTPGGS 209
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG L + LR F+PFG + +++ D T KSKGYGF+++ +A++A+EQ+
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 292 NGFELAGRPMKVGNVTER 345
NG L R ++ T +
Sbjct: 94 NGQWLGRRTIRTNWATRK 111
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+TS T +YVG++ ++TED +R F FG+I +++ K +GY F+ F +
Sbjct: 132 QTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDA 184
Query: 268 AKKAMEQLNGFELAGRPM-----KVGNVTERTDGGS 360
A KA+ Q+N ++ G+ + K G+ T +T GGS
Sbjct: 185 AAKAIVQMNNQDVGGQLVRCSWGKTGD-TGKTPGGS 219
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG L + LR F+PFG + +++ D T KSKGYGF+++ +A++A+EQ+
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 292 NGFELAGRPMKVGNVTER 345
NG L R ++ T +
Sbjct: 197 NGQWLGRRTIRTNWATRK 214
Score = 46.8 bits (106), Expect = 9e-06
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +1
Query: 94 SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAK 273
S+ P LYVG+L +TED + +F G + +++ D G + Y F+ F A
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQAS 98
Query: 274 KAMEQLNGFELAGRPMKVGNVTE 342
+A++ +N L R MKV E
Sbjct: 99 QALQTMNKRLLLDREMKVNWAVE 121
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+TS T +YVG++ ++TED +R F FG+I +++ K +GY F+ F +
Sbjct: 235 QTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDA 287
Query: 268 AKKAMEQLNGFELAGRPM-----KVGNVTERTDGGS 360
A KA+ Q+N ++ G+ + K G+ T +T GGS
Sbjct: 288 AAKAIVQMNNQDVGGQLVRCSWGKTGD-TGKTPGGS 322
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG L + LR F+PFG + +++ D T KSKGYGF+++ +A++A+EQ+
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 292 NGFELAGRPMKVGNVTER 345
NG L R ++ T +
Sbjct: 165 NGQWLGRRTIRTNWATRK 182
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+TS T +YVG++ ++TED +R F FG+I +++ K +GY F+ F +
Sbjct: 203 QTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDA 255
Query: 268 AKKAMEQLNGFELAGRPM-----KVGNVTERTDGGS 360
A KA+ Q+N ++ G+ + K G+ T +T GGS
Sbjct: 256 AAKAIVQMNNQDVGGQLVRCSWGKTGD-TGKTPGGS 290
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 94 SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTD 210
S+ P LYVG+L +TED + +F G + +++ D
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 60.9 bits (141), Expect = 5e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 16 VPIIVQHTQAEKNRVGNTLPN---LAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKI 186
+P Q Q + +G PN + +++GP RL+V ++ F E L +FE G +
Sbjct: 67 LPPPTQQKQQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV 126
Query: 187 DHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTER 345
++++ + E G SKG+GF+T + DA +A + NG + GR ++V T+R
Sbjct: 127 VDVEIIFN-ERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 60.9 bits (141), Expect = 5e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Frame = +1
Query: 16 VPIIVQHTQAEKNRVGNTLPN---LAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKI 186
+P Q Q + +G PN + +++GP RL+V ++ F E L +FE G +
Sbjct: 67 LPPPTQQKQQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV 126
Query: 187 DHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTER 345
++++ + E G SKG+GF+T + DA +A + NG + GR ++V T+R
Sbjct: 127 VDVEIIFN-ERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 177
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 60.5 bits (140), Expect = 6e-10
Identities = 25/72 (34%), Positives = 47/72 (65%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+YVG++ + TE+ + F G +++++++ D ETG+ +G+ F+ F A A++A+EQL
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 292 NGFELAGRPMKV 327
NG GR ++V
Sbjct: 68 NGVAFNGRNLRV 79
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P+TS ++VG L I LR F FG++ +++ D T K KGYGF+++
Sbjct: 126 PETSRH-FHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 265 DAKKAMEQLNGFELAGRPMKVGNVTERTD 351
DA++A++++NG L R ++ T + D
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 42.7 bits (96), Expect = 1e-04
Identities = 28/94 (29%), Positives = 49/94 (52%)
Frame = +1
Query: 34 HTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDP 213
H Q+EK T + + + T +YVG++ N+ ED +R F+ FG I+ ++
Sbjct: 237 HNQSEK-----TYDEIFNQAAADNTSVYVGNIA-NLGEDEIRRAFDRFGPINEVR----- 285
Query: 214 ETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGR 315
T K +GY F+ F A +A+ Q+N ++ G+
Sbjct: 286 -TFKIQGYAFVKFETKESAARAIVQMNNADIGGQ 318
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+Y+G L + ++E + +F +G++ +I L+ D +TGKSKG+ FL + A++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 292 NGFELAGRPMKVGNVTE 342
NG L R ++V +V E
Sbjct: 100 NGISLHKRMIRVDHVEE 116
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG L N T+D++R + FG+I I +M DP T +S+G+GF+TF + AM+Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF--HHAAD 267
RLYV + + TEDML F +G + +++ D T K +G+GF+TF H + D
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG L N T+D++R + FG+I I +M DP T +S+G+GF+TF + AM+Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF--HHAAD 267
RLYV + + TEDML F +G + +++ D T K +G+GF+TF H + D
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG L N T+D++R + FG+I I +M DP T +S+G+GF+TF + AM+Q
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF--HHAAD 267
RLYV + + TEDML F +G + +++ D T K +G+GF+TF H + D
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 169
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYVG LH ++ E +L F G + I++ D T S GY ++ F ADA++AM+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 292 NGFELAGRPMKV 327
N L G+PM++
Sbjct: 94 NFEALHGKPMRI 105
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/72 (36%), Positives = 43/72 (59%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV +L + +D L+ FE +G I ++MTD E G+SKG+GF+ F +A A+ ++
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 292 NGFELAGRPMKV 327
N + +P+ V
Sbjct: 378 NSKMVCSKPLYV 389
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+T+ T +YV + + ++ L +F FG I ++MT GKSKG+GF+ F + +
Sbjct: 207 ETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEE 264
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A++ L+ + G +K+
Sbjct: 265 AETAVQALHDSTIEGTDLKL 284
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
+G +++ +L I + F FG I ++ D E G SKGYGF+ F A+
Sbjct: 117 SGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQN 175
Query: 277 AMEQLNGFELAGRPMKVGNVTER 345
A++++NG LAG+ + VG R
Sbjct: 176 AIQKVNGMLLAGKKVFVGKFQPR 198
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYVG LH ++ E +L F G + I++ D T S GY ++ F ADA++AM+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 292 NGFELAGRPMKV 327
N L G+PM++
Sbjct: 94 NFEALHGKPMRI 105
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV +L + +D L+ FE +G I ++MTD E G+SKG+GF+ F +A A+ ++
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 292 NGFELAGRPMKVGNVTERTD 351
N + +P+ V + D
Sbjct: 318 NSKMVCSKPLYVAIAQRKED 337
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+T+ T +YV + + ++ L +F FG I ++MT GKSKG+GF+ F + +
Sbjct: 147 ETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEE 204
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A++ L+ + G +K+
Sbjct: 205 AETAVQALHDSTIEGTDLKL 224
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYVG LH ++ E +L F G + I++ D T S GY ++ F ADA++AM+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 292 NGFELAGRPMKV 327
N L G+PM++
Sbjct: 94 NFEALHGKPMRI 105
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV +L + +D L+ FE +G I ++MTD E G+SKG+GF+ F +A A+ ++
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 292 NGFELAGRPMKVGNVTERTD 351
N + +P+ V + D
Sbjct: 378 NSKMVCSKPLYVAIAQRKED 397
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
+G +++ +L I + F FG I ++ D E G SKGYGF+ F A+
Sbjct: 117 SGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQN 175
Query: 277 AMEQLNGFELAGRPMKVGNVTER 345
A++++NG LAG+ + VG R
Sbjct: 176 AIQKVNGMLLAGKKVFVGKFQPR 198
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+T+ T +YV + + ++ L +F FG I ++MT GKSKG+GF+ F + +
Sbjct: 207 ETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEE 264
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A++ L+ + G +K+
Sbjct: 265 AETAVQALHDSTIEGTDLKL 284
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
T L + L +T++ +R +F G+I+ +L+ D TG+S GYGF+ + DA +A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 286 QLNGFELAGRPMKVGNVTERTD 351
NG L + +KV D
Sbjct: 102 SFNGLRLQNKTIKVSYARPSND 123
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+ LYV + ++T L IF PFG+I ++++D TG SKG GF+ F +A A++
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 286 QLNG 297
LNG
Sbjct: 188 TLNG 191
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L+V +L + + +L +F FG I +++++ D T + KGY F++ + +A AM L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 292 NGFELAGRPMKV 327
NG LAG+ ++V
Sbjct: 435 NGTNLAGKTLQV 446
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
NG T L + +L + T + LR FE +G I + + D + +SKG+GF+ F+ DA+
Sbjct: 16 NGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEH 75
Query: 277 AMEQLNGFELAGRPMKV 327
A+++ +G + GR ++V
Sbjct: 76 ALDRTDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 55.2 bits (127), Expect = 2e-08
Identities = 26/77 (33%), Positives = 46/77 (59%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
NG T L + +L + T + LR FE +G I + + D + +SKG+GF+ F+ DA+
Sbjct: 16 NGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEH 75
Query: 277 AMEQLNGFELAGRPMKV 327
A+++ +G + GR ++V
Sbjct: 76 ALDRTDGKLVDGRELRV 92
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 55.2 bits (127), Expect = 2e-08
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 85 PKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
P+ S P R L+VG +++ +E LR FE +GKI + ++ D E GK +GY F+ +
Sbjct: 96 PRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDK 154
Query: 262 ADAKKAMEQLNGFELAGRPMKVGNVTERT 348
A+ A ++ +G ++ G+ + V RT
Sbjct: 155 AEMHTAYKKADGIKVDGKRLVVDYERGRT 183
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV +L + +D L+ FE +G I ++MTD E G+SKG+GF+ F +A A+ ++
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 292 NGFELAGRPMKVGNVTERTD 351
N + +P+ V + D
Sbjct: 315 NSKMVCSKPLYVAIAQRKED 334
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
+G +++ +L I + F FG I ++ D E G SKGYGF+ F A+
Sbjct: 54 SGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQN 112
Query: 277 AMEQLNGFELAGRPMKVGNVTER 345
A++++NG LAG+ + VG R
Sbjct: 113 AIQKVNGMLLAGKKVFVGKFQPR 135
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+T+ T +YV + + ++ L +F FG I ++MT GKSKG+GF+ F + +
Sbjct: 144 ETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEE 201
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A++ L+ + G +K+
Sbjct: 202 AETAVQALHDSTIEGTDLKL 221
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 54.4 bits (125), Expect = 4e-08
Identities = 22/71 (30%), Positives = 46/71 (64%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
++VG L +++ ++L+ F FG++ +++ D +T KSKGYGF++F + +A+ A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 292 NGFELAGRPMK 324
NG + R ++
Sbjct: 197 NGKWIGKRAVR 207
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = +1
Query: 43 AEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETG 222
+E+NR T + T T +YVG++ T+ LR +F +G I +++
Sbjct: 216 SEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------ 269
Query: 223 KSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMK 324
K++ Y F+ + A KA+ ++NG E+AG ++
Sbjct: 270 KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQVR 303
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 54.4 bits (125), Expect = 4e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P + LY+G LH +++E ML F G + I++ D + S GY ++ F A
Sbjct: 50 PNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPA 109
Query: 265 DAKKAMEQLNGFELAGRPMKV 327
DA++A++ +N + GRPM++
Sbjct: 110 DAERALDTMNFEVIHGRPMRI 130
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV ++ ++ +D LR F FG I ++M D E G+SKG+GF+ F +A A+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 292 NGFELAGRPMKVGNVTERTD 351
N + +P+ V + D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
T ++V + ++ ++ L +F FG+I +MTD + GK KG+GF+ F A +A+E
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 286 QLNGFELAGRPMKV 327
+LN L G K+
Sbjct: 297 KLNDSILEGTDCKL 310
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = +1
Query: 82 APKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
A + NG +++ +L I + F FG I ++ TD E G SKGYGF+ F
Sbjct: 139 ARRAGNG--NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 262 ADAKKAMEQLNGFELAGRPMKVGNVTER 345
A+ A+E++NG L+ + + VG R
Sbjct: 196 HSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 54.4 bits (125), Expect = 4e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P + LY+G LH +++E ML F G + I++ D + S GY ++ F A
Sbjct: 50 PNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPA 109
Query: 265 DAKKAMEQLNGFELAGRPMKV 327
DA++A++ +N + GRPM++
Sbjct: 110 DAERALDTMNFEVIHGRPMRI 130
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LYV ++ ++ +D LR F FG I ++M D E G+SKG+GF+ F +A A+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 292 NGFELAGRPMKVGNVTERTD 351
N + +P+ V + D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
T ++V + ++ ++ L +F FG+I +MTD + GK KG+GF+ F A +A+E
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVE 296
Query: 286 QLNGFELAGRPMKV 327
+LN L G K+
Sbjct: 297 KLNDSILEGTDCKL 310
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/88 (32%), Positives = 45/88 (51%)
Frame = +1
Query: 82 APKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
A + NG +++ +L I + F FG I ++ TD E G SKGYGF+ F
Sbjct: 139 ARRAGNG--NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETE 195
Query: 262 ADAKKAMEQLNGFELAGRPMKVGNVTER 345
A+ A+E++NG L+ + + VG R
Sbjct: 196 HSAQTAIEKVNGMLLSDKKVYVGKFQPR 223
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 54.4 bits (125), Expect = 4e-08
Identities = 34/112 (30%), Positives = 54/112 (48%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
T+++VG L ++ ++ L FE FG I+ ++TD T KS+GYGF+T A A++A +
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 286 QLNGFELAGRPMKVGNVTERTDGGSSTRFDADELDRAGIDLGATGRLQLMFK 441
N + GR V T L + L T +LQ +F+
Sbjct: 95 DPNPI-IDGRKANVN--LAYLGAKPRTNVQLAALAAGQVQLPLTTQLQALFQ 143
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 53.6 bits (123), Expect = 7e-08
Identities = 25/85 (29%), Positives = 48/85 (56%)
Frame = +1
Query: 73 PNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF 252
P+LA N R++ G L +++++L F + +++ + T KSKGYGF++F
Sbjct: 193 PSLAEWDEND-FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
Query: 253 HHAADAKKAMEQLNGFELAGRPMKV 327
+ D +AM +++G + RP+K+
Sbjct: 252 RDSEDYVRAMREMDGKYVGNRPIKL 276
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 52.8 bits (121), Expect = 1e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +1
Query: 82 APKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
AP+ S ++V ++H TED + F +GKI +I L D TG KGY + +
Sbjct: 47 APQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQ 106
Query: 262 ADAKKAMEQLNGFELAGRPMKV 327
+A +A++Q N +L G+ +KV
Sbjct: 107 KEANEAIDQSNDTDLLGQNVKV 128
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 51.6 bits (118), Expect = 3e-07
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +1
Query: 94 SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAK 273
S P ++++G L + T + LR F FG+++ +M DP T +++G+GF+TF +
Sbjct: 41 SQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVD 100
Query: 274 KAMEQLNGFELAGR 315
K + EL G+
Sbjct: 101 KVLNN-REHELDGK 113
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L T + ++ FE +GK++ LM D T + +G+GF+TF A K E
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE- 193
Query: 289 LNGFELAGR 315
++ E+ G+
Sbjct: 194 IHFHEINGK 202
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 51.6 bits (118), Expect = 3e-07
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +1
Query: 94 SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAK 273
S P ++++G L + T + LR F FG+++ +M DP T +++G+GF+TF +
Sbjct: 41 SQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVD 100
Query: 274 KAMEQLNGFELAGR 315
K + EL G+
Sbjct: 101 KVLNN-REHELDGK 113
Score = 43.6 bits (98), Expect = 8e-05
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L T + ++ FE +GK++ LM D T + +G+GF+TF A K E
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE- 193
Query: 289 LNGFELAGR 315
++ E+ G+
Sbjct: 194 IHFHEINGK 202
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 50.0 bits (114), Expect = 9e-07
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +1
Query: 31 QHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTD 210
Q + + +T N P +L+VG + N+ E LR +FE FGKI ++ D
Sbjct: 4 QQHEMRASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Query: 211 PETGKSKGYGFLTFHHAADAKKAMEQLN 294
TG KG FLT+ H A + L+
Sbjct: 64 KYTGMHKGCAFLTYCHRDSAVRCQATLH 91
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 82 APKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
+PK +L++G L +ED +R +F FG++D + ++ + G SKG F+ + H
Sbjct: 116 SPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYKHG 174
Query: 262 ADAKKAMEQLNG 297
DA A+ L+G
Sbjct: 175 LDAHMAISALHG 186
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +1
Query: 70 LPNLAPKTSNGPT--RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGF 243
LP + P+ GP L++ L + L +F PFG I ++ D T +SK +GF
Sbjct: 415 LPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGF 474
Query: 244 LTFHHAADAKKAMEQLNGFELAGRPMKV 327
+++ + ++ A+ +NGF++ + +KV
Sbjct: 475 VSYDNIHSSQAAITAMNGFQIGMKRLKV 502
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 50.0 bits (114), Expect = 9e-07
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +1
Query: 31 QHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTD 210
Q + + +T N P +L+VG + N+ E LR +FE FGKI ++ D
Sbjct: 4 QQHEMRASSTSSTDSNGFPVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
Query: 211 PETGKSKGYGFLTFHHAADAKKAMEQLN 294
TG KG FLT+ H A + L+
Sbjct: 64 KYTGMHKGCAFLTYCHRDSAVRCQATLH 91
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 82 APKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
+PK +L++G L +ED +R +F FG++D + ++ + G SKG F+ + H
Sbjct: 116 SPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYKHG 174
Query: 262 ADAKKAMEQLNG 297
DA A+ L+G
Sbjct: 175 LDAHMAISALHG 186
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +1
Query: 70 LPNLAPKTSNGPT--RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGF 243
LP + P+ GP L++ L + L +F PFG I ++ D T +SK +GF
Sbjct: 415 LPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGF 474
Query: 244 LTFHHAADAKKAMEQLNGFELAGRPMKV 327
+++ + ++ A+ +NGF++ + +KV
Sbjct: 475 VSYDNIHSSQAAITAMNGFQIGMKRLKV 502
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
RL++ +L + ED L+ +F+ +G++ +Q++ D +TG KG+ + F A A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 289 LNGFELAGRPMKV--GNVTERTDGGSSTRFDADELD 390
L+G+ GR M + G+ +G + D+ D
Sbjct: 340 LDGYVFKGRMMHILPGDEKRTKEGEEESEVVPDDPD 375
Score = 34.7 bits (76), Expect = 0.037
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEP-FGK-IDHIQLM-----TDPETGKSKGYGFLTFHHAADA 270
L+V +L F+ T+ L +F +G + Q+ +P S G+GF+ F+ A DA
Sbjct: 643 LFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTKPLSMGFGFVQFYTAFDA 702
Query: 271 KKAMEQLNGFELAGRPMKVG-NVTERTDGGSSTRFDADELDR 393
K A++ + G L G +++ + E D G+ R + + ++
Sbjct: 703 KTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQ 744
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L V +L TE LR +F FG+I+ L+ D +G S+G+GF+ F+ DA A ++L
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 292 NGFELAGRPMKVG-NVTER 345
+L G ++V ++T+R
Sbjct: 138 CNTDLDGHKIRVDFSLTKR 156
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 47.2 bits (107), Expect = 6e-06
Identities = 30/105 (28%), Positives = 52/105 (49%)
Frame = +1
Query: 13 GVPIIVQHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDH 192
G P+ + EK RVG K+ +++V ++HF T+D L+ +F FG +
Sbjct: 658 GRPMFISANDPEK-RVGFKFSTTLEKS-----KVFVRNVHFQATDDELKALFSKFGTVTS 711
Query: 193 IQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKV 327
++ +T + GK KG F+ F A A+K + + L R ++V
Sbjct: 712 VRRVTHKD-GKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEV 755
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N +YVG L ++E +L + G + + + D T +G+GF+ F DA
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 277 AMEQLNGFELAGRPMKVGNVT 339
A++ LN +L G+P+KV +
Sbjct: 70 AIKILNMIKLYGKPIKVNKAS 90
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHI-QLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++VG+L + E +L F FG I + ++M D ++G SKG+ F+ F + A+E
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 289 LNGFELAGRPMKVGNVTERTDGG 357
+NG L R + V +R G
Sbjct: 162 MNGQFLCNRAITVSYAFKRDSKG 184
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N +YVG L ++E +L + G + + + D T +G+GF+ F DA
Sbjct: 20 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 79
Query: 277 AMEQLNGFELAGRPMKVGNVT 339
A++ LN +L G+P+KV +
Sbjct: 80 AIKILNMIKLYGKPIKVNKAS 100
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHI-QLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++VG+L + E +L F FG I + ++M D ++G SKG+ F+ F + A+E
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 289 LNGFELAGRPMKVGNVTERTDGG 357
+NG L R + V +R G
Sbjct: 172 MNGQFLCNRAITVSYAFKRDSKG 194
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 46.8 bits (106), Expect = 9e-06
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+++ +L FN+ D L +F GKI + D E GKSKG + + H +A +A+
Sbjct: 189 RIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKE-GKSKGVCVIQYTHPIEAVQAVSM 247
Query: 289 LNGFELAGRPMKV 327
LNG L R + V
Sbjct: 248 LNGQRLFDRNLVV 260
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 46.8 bits (106), Expect = 9e-06
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEP-FGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++VG+L F ITED L F G ++ ++++ D +TGK KG+ F+ F + A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL-S 306
Query: 289 LNGFELAGRPMKVGNVTER 345
+ ++ R +++ V ++
Sbjct: 307 METIKMEKRDLRITKVMKK 325
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = +1
Query: 118 VGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNG 297
V +L + ED LR +F G++ I + D TG KG+ F+TF DA +A+ +LN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 298 FELAGRPMKV 327
+ +KV
Sbjct: 240 IRMYHMVLKV 249
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P S +++VG L + +E LR FE FGK+D I+ D +T + + F+ F
Sbjct: 103 PAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Query: 265 DAKKAMEQ 288
A KA Q
Sbjct: 163 SADKASSQ 170
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N +++VG + + + L F +G++ Q+ D G+S+G+ F+ F K
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 277 AM 282
A+
Sbjct: 86 AL 87
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P S +++VG L + +E LR FE FGK+D I+ D +T + + F+ F
Sbjct: 103 PAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEE 162
Query: 265 DAKKAMEQ 288
A KA Q
Sbjct: 163 SADKASSQ 170
Score = 34.7 bits (76), Expect = 0.037
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N +++VG + + + L F +G++ Q+ D G+S+G+ F+ F K
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 277 AM 282
A+
Sbjct: 86 AL 87
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/81 (27%), Positives = 45/81 (55%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P+ + ++YVG+L ++ E + IF +G+I ++ D ++G+ + F+ F
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHR 57
Query: 265 DAKKAMEQLNGFELAGRPMKV 327
DA+ A+ +G+E GR ++V
Sbjct: 58 DAEDAVRARDGYEFDGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/81 (27%), Positives = 45/81 (55%)
Frame = +1
Query: 85 PKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAA 264
P+ + ++YVG+L ++ E + IF +G+I ++ D ++G+ + F+ F
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHR 57
Query: 265 DAKKAMEQLNGFELAGRPMKV 327
DA+ A+ +G+E GR ++V
Sbjct: 58 DAEDAVRARDGYEFDGRRIRV 78
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 91 TSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADA 270
T+ T LY+ L N +D+LR + +G I + + D T KGYGF+ F A
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 271 KKAMEQLN 294
A++ LN
Sbjct: 162 AAAVDGLN 169
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
PT LY+ +L + TE ML FG + +++ P+ +S+G GF + +
Sbjct: 187 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPD-NQSRGVGFARMDSKEKCEVII 245
Query: 283 EQLNG 297
LNG
Sbjct: 246 SALNG 250
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L++ L + + L F PFG I ++ D T SK +GF+++ +A A A+ +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 292 NGFELAGRPMKV 327
NGF++ + +KV
Sbjct: 397 NGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L++ L + + L F PFG I ++ D T SK +GF+++ +A A A+ +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 292 NGFELAGRPMKV 327
NGF++ + +KV
Sbjct: 561 NGFQIGSKRLKV 572
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + + A A ++
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 289 LN 294
++
Sbjct: 202 MH 203
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L++ L + + L F PFG I ++ D T SK +GF+++ +A A A+ +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 292 NGFELAGRPMKV 327
NGF++ + +KV
Sbjct: 561 NGFQIGSKRLKV 572
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + + A A ++
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 289 LN 294
++
Sbjct: 202 MH 203
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L++ L + + L F PFG I ++ D T SK +GF+++ +A A A+ +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 292 NGFELAGRPMKV 327
NGF++ + +KV
Sbjct: 490 NGFQIGSKRLKV 501
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + + A A ++
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 289 LN 294
++
Sbjct: 202 MH 203
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
L++ L + + L F PFG I ++ D T SK +GF+++ +A A A+ +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 292 NGFELAGRPMKV 327
NGF++ + +KV
Sbjct: 561 NGFQIGSKRLKV 572
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + + A A ++
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 289 LN 294
++
Sbjct: 202 MH 203
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
T LY+ L N +D+LR + +G I + + D T KGYGF+ F A A++
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 286 QLN 294
LN
Sbjct: 141 GLN 143
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
PT LY+ +L + TE ML FG + +++ P+ +S+G GF + +
Sbjct: 161 PTNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPD-NQSRGVGFARMDSKEKCEVII 219
Query: 283 EQLNG 297
LNG
Sbjct: 220 SALNG 224
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +1
Query: 67 TLP-NLAPKT----SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSK 231
T+P ++ PKT S R+YV ++ F+ E L +F +G++ ++++T+ + G SK
Sbjct: 33 TMPISVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRG-SK 90
Query: 232 GYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVT 339
G+GF+T +KA L+ + GR ++V T
Sbjct: 91 GFGFVTLDSIESCEKARAALHESHVQGRIIEVRRAT 126
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +1
Query: 67 TLP-NLAPKT----SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSK 231
T+P ++ PKT S R+YV ++ F+ E L +F +G++ ++++T+ + G SK
Sbjct: 33 TMPISVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRG-SK 90
Query: 232 GYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVT 339
G+GF+T +KA L+ + GR ++V T
Sbjct: 91 GFGFVTLDSIESCEKARAALHESHVQGRIIEVRRAT 126
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
P R++VG + TE LR FE F + ++++ + G+SKGYGF+TF D + +
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITF-ETEDQAEEI 122
Query: 283 EQLNGFELAGRPMKV 327
+L +L R K+
Sbjct: 123 RKLTPKQLEFRSRKL 137
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
+L++G L + T++ L F +G + ++ DP T S+G+GF+TF A+ AM
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
+L++G L + T++ L F +G + ++ DP T S+G+GF+TF A+ AM
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
+L++G L + T++ L F +G + ++ DP T S+G+GF+TF A+ AM
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF--HHAAD 267
RLYV + + TEDML F +G + +++ D T K +G+GF+TF H + D
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 131
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 154 LRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+R + FG+I I +M DP T +S+G+GF+TF + AM+Q
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTF--HHAAD 267
RLYV + + TEDML F +G + +++ D T K +G+GF+TF H + D
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVD 131
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 154 LRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+R + FG+I I +M DP T +S+G+GF+TF + AM+Q
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 45
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
P R++VG + TE LR FE F + ++++ + G+SKGYGF+TF D + +
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITF-ETEDQAEEI 123
Query: 283 EQLNGFELAGRPMKV 327
+L +L R K+
Sbjct: 124 RKLTPKQLEFRSRKL 138
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHH---AADAKKA 279
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + A A K
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 280 MEQLNGFELAG 312
M EL G
Sbjct: 202 MHHSQTMELGG 212
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+L++G L E+ LR IF FG I+ ++ D + GKS+G F+TF + + A A ++
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTFTNRSCAVVATKE 201
Query: 289 LN 294
++
Sbjct: 202 MH 203
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
+++VG + E R +FE +G + ++ D T SKG F+TF+H DA +A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 289 LNGFEL 306
L+ ++
Sbjct: 116 LHNIKV 121
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/72 (31%), Positives = 39/72 (54%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
LY+ +L + IT + + IF FG + I++ ET +G F+ + DAK A E L
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAET---RGTAFVVYEDIFDAKTACEHL 77
Query: 292 NGFELAGRPMKV 327
+G+ ++ R + V
Sbjct: 78 SGYNVSNRYLVV 89
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRG----IFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKA 279
+YV +L+ + +D L+ +F FG+I IQLM+ + K +G + F + A A
Sbjct: 10 IYVNNLNEKVKKDELKRSLHMVFTQFGEI--IQLMSFRKE-KMRGQAHIVFKEVSSASNA 66
Query: 280 MEQLNGFELAGRPMKVGNVTERTD 351
+ L GF G+PM++ E +D
Sbjct: 67 LRALQGFPFYGKPMRIQYAREDSD 90
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+Y+G L ++E + F +G+I + L G+GF+ F DA+ A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 289 LNGFELAGRPMKVGNVTERTDGGSSTRF 372
LNG EL G + + R GG F
Sbjct: 56 LNGKELGGERVILDYSKPRGGGGDRGGF 83
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+Y+G L ++E + F +G+I + L G+GF+ F DA+ A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 289 LNGFELAGRPMKVGNVTERTDGGSSTRF 372
LNG EL G + + R GG F
Sbjct: 56 LNGKELGGERVILDYSKPRGGGGDRGGF 83
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 41.5 bits (93), Expect = 3e-04
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+Y+G L ++E + F +G+I + L G+GF+ F DA+ A+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 289 LNGFELAGRPMKVGNVTERTDGGSSTRF 372
LNG EL G + + R GG F
Sbjct: 56 LNGKELGGERVILDYSKPRGGGGDRGGF 83
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +1
Query: 163 IFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTE 342
+FE G + ++++ + E G SKG+GF+T + DA +A + NG + GR ++V T+
Sbjct: 1 MFEKVGPVVDVEIIFN-ERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 343 R 345
R
Sbjct: 59 R 59
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L +TED ++ + FG + L D + G SKGY F + +A+
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 350
Query: 289 LNGFELAGRPMKV 327
LNG +L + + V
Sbjct: 351 LNGMQLGDKQLVV 363
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L +TED ++ + FG + L D + G SKGY F + +A+
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 350
Query: 289 LNGFELAGRPMKV 327
LNG +L + + V
Sbjct: 351 LNGMQLGDKQLVV 363
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L +TED ++ + FG + L D + G SKGY F + +A+
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 325
Query: 289 LNGFELAGRPMKV 327
LNG +L + + V
Sbjct: 326 LNGMQLGDKQLVV 338
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 6e-04
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++++G L +TED ++ + FG + L D + G SKGY F + +A+
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQAIAG 328
Query: 289 LNGFELAGRPMKV 327
LNG +L + + V
Sbjct: 329 LNGMQLGDKQLVV 341
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 40.3 bits (90), Expect = 7e-04
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 169 EPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNV--TE 342
E K D I L+ D ++G KG+ ++TF + A+ LNG + R +KV +
Sbjct: 34 EELKKFD-IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRD 92
Query: 343 RTD-GGSSTRFDADELDRAGIDLGATG 420
R+D GG + DR G GA G
Sbjct: 93 RSDRGGGRGGRGGNFGDRGGRGRGAGG 119
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 133 FNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGF 300
F E L G F FG + I++ + TG KG+ ++ F + A A+ A E +NG+
Sbjct: 41 FGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGY 96
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
K G RL+VG+L + E L+ +F P G I L KG+ FL A
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAH 162
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A E ++G + GR ++V
Sbjct: 163 AESAKEAIDGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 38/80 (47%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
K G RL+VG+L + E L+ +F P G I L KG+ FL A
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAH 162
Query: 268 AKKAMEQLNGFELAGRPMKV 327
A+ A E ++G + GR ++V
Sbjct: 163 AESAKEAIDGRIIHGRQVRV 182
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 31 QHTQAEKNRVGNTLPNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMT 207
Q AE+ ++ + +L P L+V L+ T++ L IF FGKI++ +++
Sbjct: 215 QREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 274
Query: 208 DPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKV 327
D +G S Y F+ F +A ++A +++ + R + V
Sbjct: 275 DRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 31 QHTQAEKNRVGNTLPNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMT 207
Q AE+ ++ + +L P L+V L+ T++ L IF FGKI++ +++
Sbjct: 215 QREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 274
Query: 208 DPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKV 327
D +G S Y F+ F +A ++A +++ + R + V
Sbjct: 275 DRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 31 QHTQAEKNRVGNTLPNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMT 207
Q AE+ ++ + +L P L+V L+ T++ L IF FGKI++ +++
Sbjct: 146 QREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVR 205
Query: 208 DPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKV 327
D +G S Y F+ F +A ++A +++ + R + V
Sbjct: 206 DRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 245
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAAD 267
+ N +Y+ + + + L F+ +G I + + DP+TG +G+ +TF
Sbjct: 19 RPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDG 78
Query: 268 AKKAMEQ 288
A KA+EQ
Sbjct: 79 ANKAIEQ 85
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++YVG L + T L IF+ FG+I + + P G+ F+ + DA+ A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRA 58
Query: 289 LNGFELAGRPMKVGNVTERTDGG 357
L+G + G +V T + GG
Sbjct: 59 LDGSRICGVRARVELSTGQRRGG 81
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++YVG L + T L IF+ FG+I + + P G+ F+ + DA+ A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRA 58
Query: 289 LNGFELAGRPMKVGNVTERTDGG 357
L+G + G +V T + GG
Sbjct: 59 LDGSRICGVRARVELSTGQRRGG 81
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
++YVG L + T L IF+ FG+I + + P G+ F+ + DA+ A+
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRP-----PGFAFVEYDDVRDAEDAVRA 58
Query: 289 LNGFELAGRPMKVGNVTERTDGG 357
L+G + G +V T + GG
Sbjct: 59 LDGSRICGVRARVELSTGQRRGG 81
>AF038605-5|AAB92019.1| 211|Caenorhabditis elegans Hypothetical
protein C02B10.4 protein.
Length = 211
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/89 (31%), Positives = 45/89 (50%)
Frame = +1
Query: 61 GNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYG 240
G T P + + GP+ L + +L +T++ L +FE + + + +QL P TG+S G
Sbjct: 78 GRTAPAVVREIHTGPSTLIIKNLATTVTQEDLEELFEQY-EPELVQLHYGP-TGESNGCA 135
Query: 241 FLTFHHAADAKKAMEQLNGFELAGRPMKV 327
L HA A + L G L G P++V
Sbjct: 136 DLIVPHAQVA-IIQKALEGVLLDGEPIEV 163
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADA--KKAME 285
L+VG++ ++ E +R +FE GK++ + + T T Y F+ F A KA E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAEE 228
Query: 286 QLNGFELAGRPMKVG 330
Q G MK+G
Sbjct: 229 QDRPIRAGGSRMKIG 243
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADA--KKAME 285
L+VG++ ++ E +R +FE GK++ + + T T Y F+ F A KA E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAEE 228
Query: 286 QLNGFELAGRPMKVG 330
Q G MK+G
Sbjct: 229 QDRPIRAGGSRMKIG 243
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 38.7 bits (86), Expect = 0.002
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADA--KKAME 285
L+VG++ ++ E +R +FE GK++ + + T T Y F+ F A KA E
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINT--DAAYAFVMFQTVDQAIQAKAEE 205
Query: 286 QLNGFELAGRPMKVG 330
Q G MK+G
Sbjct: 206 QDRPIRAGGSRMKIG 220
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 37.9 bits (84), Expect = 0.004
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLR----GIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKA 279
LY+ +L+ I D LR +F+ FG+I + T K +G + F A A
Sbjct: 10 LYINNLNEKIKIDELRKSLVAVFKQFGEIVSVMCF---RTLKMRGQAHVIFKELPAASAA 66
Query: 280 MEQLNGFELAGRPMKVGNVTERTD 351
E LNGF +PM++ E +D
Sbjct: 67 REALNGFPFYEKPMRIQFAREDSD 90
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.009
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+YVG++ + T + + F G + + + D +G KG+ ++ F + A+
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 292 NGFELAGRPMKVGNVTERTDGGSST 366
+ L GR +KV G S+T
Sbjct: 140 DSL-LRGRQIKVDPKRTNKPGMSTT 163
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
RLY+G + +N E + + +GKI++I + G+ F+ F + DA+ A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHD 54
Query: 289 LNGFELAGRPMKV 327
L+G + G M++
Sbjct: 55 LDGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
RLY+G + +N E + + +GKI++I + G+ F+ F + DA+ A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHD 54
Query: 289 LNGFELAGRPMKV 327
L+G + G M++
Sbjct: 55 LDGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.012
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
RLY+G + +N E + + +GKI++I + G+ F+ F + DA+ A
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDACHD 54
Query: 289 LNGFELAGRPMKV 327
L+G + G M++
Sbjct: 55 LDGKTMEGSSMRL 67
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 35.9 bits (79), Expect = 0.016
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 109 RLYVGSL-HFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
R+++G++ IT D + +F PFGKI + +G+GF+ F+ A A ++
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQ------QGFGFVQFNEAGSADESCR 137
Query: 286 QLNG 297
LNG
Sbjct: 138 SLNG 141
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.5 bits (78), Expect = 0.021
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKS-KGYGFLTFHHAADAKKAME 285
RL + +L F ++ L+ + GK I L + K+ G+GF+ F ADA+K E
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 286 QLNGFELAGR 315
N ++ GR
Sbjct: 156 FFNTNKVLGR 165
Score = 32.7 bits (71), Expect = 0.15
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+++ +L ++ E++++ FGKID + ++G SKG F+ F +A +E
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIE 322
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 35.5 bits (78), Expect = 0.021
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +1
Query: 97 NGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKK 276
N L+V S+ ++ + L IF+ + ++ + G SKG GF+ F + D +
Sbjct: 153 NSEFNLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVD-GSSKGSGFVRFGNQTDQQM 211
Query: 277 AMEQLNGFELAGRPM---KVGNVTERTDGGSSTRFDADELDR 393
A+ +++ ++ G + G+ ER D G S +F + DR
Sbjct: 212 ALVEMHRTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDR 253
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 70 LPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLT 249
LP ++ +N L++G + + TE+ L +F G + ++ + KGY F+
Sbjct: 56 LPAISLSGNNAQRTLWIGDVPTDWTEETLSQVFTECGHAPY-KVKRVYVKDELKGYCFIE 114
Query: 250 FHHAADAKKAMEQLNGFELAG 312
F +A++ + LNG + G
Sbjct: 115 FITFDEARQTLYDLNGNRIPG 135
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 35.5 bits (78), Expect = 0.021
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +1
Query: 109 RLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQ 288
R+Y+G L ++ + F +GK+ + + G+GF+ F DA A+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHD 54
Query: 289 LNGFELAGRPM-------KVGNVTERTDGG 357
LNG EL G + KVG ER+ G
Sbjct: 55 LNGKELCGERVILEFPRRKVGYNEERSGSG 84
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
P++L+VG+L N+ + L+ +F+PF K+ ++ K Y F+ D +
Sbjct: 2 PSKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEE-DDVDPII 52
Query: 283 EQLNGFELAGRPMKVGNVTER 345
+L G+ + G+ + + T +
Sbjct: 53 TRLTGYTIDGKVVNIKKSTSK 73
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
P++L+VG+L N+ + L+ +F+PF K+ ++ K Y F+ D +
Sbjct: 2 PSKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIV--------KNYAFVHIEE-DDVDPII 52
Query: 283 EQLNGFELAGRPMKVGNVTER 345
+L G+ + G+ + + T +
Sbjct: 53 TRLTGYTIDGKVVNIKKSTSK 73
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 35.1 bits (77), Expect = 0.028
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 193 IQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNG--FELAGRPMKVGNVTERTDGG 357
I++ TD TG+ KG +TF A+ A++A+ NG F PM + R D G
Sbjct: 236 IKIYTDRNTGEPKGECMITFVDASAAQQAITMYNGQPFPGGSSPMSISLAKFRADAG 292
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/82 (21%), Positives = 36/82 (43%)
Frame = +1
Query: 37 TQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPE 216
+ ++ R G + A + + P L V + F T++ + FE G + ++ +
Sbjct: 150 SDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD 209
Query: 217 TGKSKGYGFLTFHHAADAKKAM 282
G SKG+GF+ + K +
Sbjct: 210 -GNSKGFGFVRMSSVGEQNKVL 230
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 94 SNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTD 210
S+ P LYVG+L +TED + +F G + +++ D
Sbjct: 42 SDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 163 IFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTE 342
+F+ FGK+ + +++ G+ + GF+ ADA + + LN L G +
Sbjct: 32 VFQNFGKVSYCRVVGQSNDGQVQ-LGFVNMMSVADADEVRKNLNDGNLIGENFTLKVTDH 90
Query: 343 RTDGGS 360
+ GGS
Sbjct: 91 KNVGGS 96
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 31.9 bits (69), Expect = 0.26
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 163 IFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTE 342
+F+ FGK+ + +++ G+ + GF+ ADA + + LN L G +
Sbjct: 32 VFQNFGKVSYCRVVGQSNDGQVQ-LGFVNMMSVADADEVRKNLNDGNLIGENFTLKVTDH 90
Query: 343 RTDGGS 360
+ GGS
Sbjct: 91 KNVGGS 96
>Z30215-4|CAA82936.1| 541|Caenorhabditis elegans Hypothetical
protein F40F12.4 protein.
Length = 541
Score = 31.5 bits (68), Expect = 0.34
Identities = 23/86 (26%), Positives = 34/86 (39%)
Frame = +1
Query: 46 EKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGK 225
EKN G N+ P+ P ++Y+ + HF D L+G F I++ M E
Sbjct: 194 EKNDPGPVFINI-PEQGPVPFQIYIIADHFTFNSDNLKGGFAIIDSIEYYARMCSLEEKS 252
Query: 226 SKGYGFLTFHHAADAKKAMEQLNGFE 303
S Y H+ E + FE
Sbjct: 253 SFDYSQKDSSHSIPLIPLAESKDEFE 278
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 31.5 bits (68), Expect = 0.34
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 88 KTSNGPTR-LYVGSLHFNITEDMLRGIFEP-FGKIDHIQLMTDPETGKSKGYGFLTFHHA 261
+T P R ++VG+LH +T +L I E FG ++ +QL TD + G G +TF
Sbjct: 431 ETGIEPKRTVFVGALHGMMTAQVLHSIMEDCFGAVECVQLDTD-KFKYPIGSGRVTFREH 489
Query: 262 ADAKKAME 285
KA+E
Sbjct: 490 GAYFKAIE 497
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +1
Query: 31 QHTQAEKNRVGNT--LPNLAPKTSNGPT---RLYVGSLHFNITEDMLRGIFEPFG 180
Q KNR + L P+ PT +++VG + ++ITE L+ F FG
Sbjct: 265 QQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 83 protein.
Length = 717
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 139 ITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAME 285
+TED ++GIFE +D +L T+P S+G H++ ++ +E
Sbjct: 214 LTEDGMKGIFEQLISMDPDRLATNPHRKPSRGPSSSLPHNSIGSRSPVE 262
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.9 bits (64), Expect = 1.0
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 73 PNLAPKTSNGPTRLYVGSL----HFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYG 240
P L+P T LY+G+L +TE L F +G I ++++T+ KG
Sbjct: 224 PTLSPPADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCA 277
Query: 241 FLTFHHAADAKKAMEQ 288
F+ F A++A E+
Sbjct: 278 FIEFTTREAAERAAER 293
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 112 LYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAMEQL 291
+YVG++ + T + F GK+ + + D TG K + F+ F + A+ L
Sbjct: 48 VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VL 106
Query: 292 NGFELAGRPMKV 327
+G R + V
Sbjct: 107 SGTMFRNRKIMV 118
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Frame = +1
Query: 109 RLYVGSLHFNITE-----------DMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFH 255
++YVG++ F+ TE D + +F G I I + P G+ F+TF
Sbjct: 18 QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPP-----GFAFVTFK 72
Query: 256 HAADAKKAMEQLNGFELAGRPMKV 327
A A++ LNG ++ KV
Sbjct: 73 RTVHAFDAVKYLNGKKICDLEAKV 96
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 106 TRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLM---TDPETGKSKGYGFLTFHHAADAKK 276
T +YV ++ ++TED L F FG + ++++ ++ E + F+ F AD +
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAFVAFMSRADVDR 259
Query: 277 AMEQLNGFELAGRPMK 324
M ++ + P++
Sbjct: 260 FMAEVRVIIVRNEPIR 275
>Z68134-2|CAA92223.1| 182|Caenorhabditis elegans Hypothetical
protein T27A8.3 protein.
Length = 182
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 208 DPETGKSKGY-GFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTERTDGGSSTRFDADE 384
+P+T +SK FH ++ K + LNG +A + G GG R + +E
Sbjct: 15 EPQTAQSKNTESKCEFHGNSNEVKPIGSLNGQSIAQCRIHTGKTVPIVKGGEQARMEENE 74
Query: 385 LDRAGIDLGATGR 423
+ A G+TG+
Sbjct: 75 I-YAIETFGSTGK 86
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 29.1 bits (62), Expect = 1.8
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 GYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTERTDGGSSTRFDADELDR-AGIDL 408
GYGF+ F A+A+K + +++G L G+ + V T G R ++E + DL
Sbjct: 131 GYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRPMSEESPTPSSTDL 190
Query: 409 G 411
G
Sbjct: 191 G 191
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 88 KTSNGPTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFL 246
K G RL+VG+L + E L+ +F P G I L KG+ FL
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFL 155
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 27.1 bits (57), Expect = 7.4
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +1
Query: 103 PTRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGFLTFHHAADAKKAM 282
P +L++ +L L+ IF I + P SK F+TF DA+ A
Sbjct: 637 PLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAF 693
Query: 283 EQLNGFEL 306
+ NG ++
Sbjct: 694 AKSNGLKV 701
>AF078785-8|AAC27095.1| 658|Caenorhabditis elegans Hypothetical
protein C04E12.10 protein.
Length = 658
Score = 26.6 bits (56), Expect = 9.8
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 192 VIDFPKRFKYASKHIFCNIKMKRTDIQSGRSITSFWC*V-WQRVAYSVL 49
++++P Y S + NI++ +TD+ +S+ +F V WQ + L
Sbjct: 385 IMEYPVDMLYISVVLSDNIRLFKTDVNDRKSVETFSIEVFWQNTTETTL 433
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 26.6 bits (56), Expect = 9.8
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 76 NLAPKTSNG--PTRLYVG--SLHFNITEDMLRGIFEPFGKIDHIQLMTDPETGKSKGYGF 243
++ K S+G P Y+ L FN TE + F I+ ++ + TG+ G +
Sbjct: 50 SMPTKISSGEPPRSQYIRLRGLPFNATEKDIHEFFAGL-TIERVKFVCT--TGRPNGEAY 106
Query: 244 LTFHHAADAKKAMEQLNGFELAGRPMKVGNV 336
+ F + +A KAME + E++ R ++V V
Sbjct: 107 VEFKNTEEAGKAMEN-DRKEISNRYIEVFTV 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,176,364
Number of Sequences: 27780
Number of extensions: 267759
Number of successful extensions: 944
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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