Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M01
(337 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 116 1e-25
UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1; ... 112 1e-24
UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 103 1e-21
UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2; ... 90 8e-18
UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 88 3e-17
UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 85 3e-16
UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;... 83 1e-15
UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 83 2e-15
UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1; ... 76 2e-13
UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1; ... 75 3e-13
UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10; Ascomyco... 75 3e-13
UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 75 3e-13
UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;... 75 4e-13
UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 74 7e-13
UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 72 3e-12
UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 71 4e-12
UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=... 71 7e-12
UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 69 2e-11
UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 67 8e-11
UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subun... 66 1e-10
UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium ha... 63 1e-09
UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); al... 60 7e-09
UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep: CoA-b... 58 3e-08
UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1; Candid... 58 5e-08
UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;... 56 1e-07
UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subun... 56 1e-07
UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;... 50 1e-05
UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2; Thermo... 45 4e-04
UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein NCU098... 44 5e-04
UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=... 43 0.001
UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1; ... 42 0.003
UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;... 40 0.011
UniRef50_Q968N3 Cluster: Succinyl CoA synthetase alpha subunit; ... 39 0.025
UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1; ... 38 0.044
UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit; ... 36 0.14
UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3; Chroococc... 35 0.31
UniRef50_A4ALC7 Cluster: Putative uncharacterized protein; n=5; ... 34 0.72
UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;... 32 2.2
UniRef50_Q54VV3 Cluster: Putative uncharacterized protein; n=1; ... 32 2.2
UniRef50_Q8YKE0 Cluster: Alr7358 protein; n=3; Nostocaceae|Rep: ... 32 2.9
UniRef50_Q0S9J9 Cluster: Probable Zn-binding oxidoreductase; n=1... 31 3.8
UniRef50_A7AX02 Cluster: Ankyrin repeat domain containing protei... 31 5.1
UniRef50_A5K4M7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q2L6X8 Cluster: Patterned expression site protein 22, i... 31 6.7
UniRef50_Q5L6J2 Cluster: Polymorphic outer membrane protein; n=3... 30 8.9
UniRef50_Q1JIU6 Cluster: CoA binding protein; n=45; Streptococca... 30 8.9
UniRef50_A5G1T4 Cluster: PpiC-type peptidyl-prolyl cis-trans iso... 30 8.9
>UniRef50_Q94522 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=81; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 328
Score = 116 bits (278), Expect = 1e-25
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = +3
Query: 27 MAVPVQILSRFKNGLKLSNVRFACGNPYSETRKNLVLTSETKVIVQGFTGKQGTFHSQQA 206
MA ++ L + ++G ++ VR C + Y++TR NL L +++VI QGFTGKQGTFHSQQA
Sbjct: 1 MAASMRALLKVRDGF-VAGVR--CNSQYNKTRGNLKLNGDSRVICQGFTGKQGTFHSQQA 57
Query: 207 LDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASVI 335
L+YGTK+VGGISPKK G +HLG PVFA+V A AT A+VI
Sbjct: 58 LEYGTKLVGGISPKKGGTQHLGLPVFASVAEAKKATDPHATVI 100
>UniRef50_A6RFY2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 138
Score = 112 bits (270), Expect = 1e-24
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = +3
Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
Y+ T NL + S+TKVI QGFTGKQGTFH+QQA+DYGT VVGG +PKKAGQ HLGKPVFA
Sbjct: 30 YAATADNLRINSDTKVIYQGFTGKQGTFHAQQAIDYGTNVVGGTNPKKAGQTHLGKPVFA 89
Query: 288 TVK*AMNATQAQASVI 335
TV+ A+ T A AS I
Sbjct: 90 TVRDAVKETGATASAI 105
>UniRef50_P53597 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor; n=313; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha, mitochondrial precursor - Homo sapiens (Human)
Length = 333
Score = 103 bits (246), Expect = 1e-21
Identities = 49/76 (64%), Positives = 58/76 (76%)
Frame = +3
Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
Y+ +R++L + TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K GQ HLG PVF
Sbjct: 30 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89
Query: 288 TVK*AMNATQAQASVI 335
TVK A T A ASVI
Sbjct: 90 TVKEAKEQTGATASVI 105
>UniRef50_A5ATZ1 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Vitis vinifera (Grape)
Length = 468
Score = 90.2 bits (214), Expect = 8e-18
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +3
Query: 147 TKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQA 326
T+VI QG TGK GTFH++QA++YGTK+VGG++PKK G EHLG P+F TV A T+A A
Sbjct: 41 TRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGMEHLGLPIFNTVAEAKAETRANA 100
Query: 327 SVI 335
SVI
Sbjct: 101 SVI 103
>UniRef50_P45102 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=125; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Haemophilus influenzae
Length = 293
Score = 88.2 bits (209), Expect = 3e-17
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+++ TKVI QGFTG QGTFHS+QAL YGT++VGG+SP K G HLG PVF TV+ A+
Sbjct: 3 ILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKGGTTHLGLPVFNTVREAVE 62
Query: 309 ATQAQASVI 335
T A+VI
Sbjct: 63 NTGVTATVI 71
>UniRef50_Q9AKE1 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=29; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Rickettsia typhi
Length = 292
Score = 85.0 bits (201), Expect = 3e-16
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+++ +TKVI QGFTG QGTFHS+QA+ YGT +VGG++P K G HL PV+ TV A
Sbjct: 3 ILINKKTKVICQGFTGSQGTFHSEQAIAYGTNMVGGVTPGKGGHTHLNLPVYNTVHEAKA 62
Query: 309 ATQAQASVI 335
T A ASVI
Sbjct: 63 KTDANASVI 71
>UniRef50_A6DYT9 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Roseovarius|Rep: Succinyl-CoA synthetase, alpha
subunit - Roseovarius sp. TM1035
Length = 299
Score = 83.0 bits (196), Expect = 1e-15
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+ + SET++IVQG TG+ GTF++ +A+ YGT VGG+ P K G HLG P+F TV+ A+
Sbjct: 3 IFVNSETRLIVQGMTGRSGTFYTDEAMRYGTTCVGGVRPGKGGARHLGLPLFNTVREAVE 62
Query: 309 ATQAQASVI 335
ATQA AS++
Sbjct: 63 ATQANASLV 71
>UniRef50_Q58643 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=95; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanococcus jannaschii
Length = 294
Score = 82.6 bits (195), Expect = 2e-15
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +3
Query: 123 KNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*A 302
K ++L TK IVQG TG+QG+FH+++ L+ GTK+VGG++P K GQ G PVF TVK A
Sbjct: 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEA 65
Query: 303 MNATQAQASVI 335
+ T A ASVI
Sbjct: 66 VKETDANASVI 76
>UniRef50_UPI000023F548 Cluster: hypothetical protein FG11485.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG11485.1 - Gibberella zeae PH-1
Length = 320
Score = 75.8 bits (178), Expect = 2e-13
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +3
Query: 123 KNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*A 302
+NL++ T+VI QGFTGK T +++ A+ YGT +VGG+SPKK G +L PVFATV+ A
Sbjct: 41 QNLMVNETTRVIYQGFTGKTATNNARDAIAYGTNIVGGVSPKKGGTTNLDLPVFATVRGA 100
Query: 303 MNATQAQASVI 335
+ + AS++
Sbjct: 101 AQSVRPNASLV 111
>UniRef50_Q4PDB0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 357
Score = 74.9 bits (176), Expect = 3e-13
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHL-GKPVF 284
YS T NL + VIVQGFTGK T H+Q +LD GT VVGG++P K G +HL G+PVF
Sbjct: 42 YSNTIPNLAAGPHSNVIVQGFTGKASTVHTQISLDMGTNVVGGVAPGKGGSKHLGGRPVF 101
Query: 285 ATVK*AMNA 311
++K ++A
Sbjct: 102 NSIKQVLDA 110
>UniRef50_Q2U2T2 Cluster: Succinyl-CoA synthetase; n=10;
Ascomycota|Rep: Succinyl-CoA synthetase - Aspergillus
oryzae
Length = 688
Score = 74.9 bits (176), Expect = 3e-13
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +3
Query: 21 KTMAVPVQILS-RFKNGLKLSNVRFACGNPYSETRKNLVLTSETKVIVQGFTGKQGTFHS 197
+ VP LS R NG S+ ++ Y++T NL + + T+V+ QGFTG+Q T +
Sbjct: 10 RARGVPFSRLSARQTNGFSTSSRSYS----YADTLPNLKIGAHTRVLFQGFTGRQATANV 65
Query: 198 QQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASVI 335
+++L +GTK+VGG+ P G EHLG PVF +VK A + AS I
Sbjct: 66 KESLAWGTKIVGGVKPGVEG-EHLGLPVFPSVKAAQEKAKPDASAI 110
>UniRef50_O28733 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha 1; n=72; cellular organisms|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha 1 - Archaeoglobus
fulgidus
Length = 291
Score = 74.9 bits (176), Expect = 3e-13
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+++ T+VIVQG TG QG+F +++ LDYGTKVVGG++P K G E G PV+ TV+ A+
Sbjct: 6 ILVDENTRVIVQGITGFQGSFQAKRMLDYGTKVVGGVTPGKGGSEVHGIPVYNTVEEAVA 65
Query: 309 ATQAQASVI 335
T A S+I
Sbjct: 66 ETNADTSII 74
>UniRef50_A2QQL8 Cluster: Contig An08c0100, complete genome; n=3;
Pezizomycotina|Rep: Contig An08c0100, complete genome -
Aspergillus niger
Length = 355
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = +3
Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
Y++T NL + + T+V+ QGFTG+Q T + +++L++GTK+VGG+ P G EHLG PVF
Sbjct: 35 YADTLPNLKIGAHTRVLFQGFTGRQATANVKESLEWGTKIVGGVKPGVEG-EHLGLPVFP 93
Query: 288 TVK*AMNATQAQASVI 335
+VK A + AS I
Sbjct: 94 SVKAAQERAKPDASAI 109
>UniRef50_O26663 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=13; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Methanobacterium
thermoautotrophicum
Length = 293
Score = 73.7 bits (173), Expect = 7e-13
Identities = 31/69 (44%), Positives = 48/69 (69%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
++L +T+ +VQG TGKQG+FH++Q L+YGT++V G++P K GQE LG V+ +V+
Sbjct: 7 ILLDEDTRCLVQGITGKQGSFHTRQMLEYGTRIVAGVTPGKGGQEFLGVDVYNSVEEVTE 66
Query: 309 ATQAQASVI 335
AS+I
Sbjct: 67 EMDVNASII 75
>UniRef50_Q8A9M8 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=4; Bacteria|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Bacteroides
thetaiotaomicron
Length = 286
Score = 71.7 bits (168), Expect = 3e-12
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +3
Query: 126 NLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AM 305
++++ T++IVQG TG+ G FH+++ +YGT VVGG SP K G E G PVF T+ A+
Sbjct: 2 SILIDKSTRLIVQGITGRDGLFHAKKMKEYGTNVVGGTSPGKGGTEVDGIPVFNTMHEAV 61
Query: 306 NATQAQASVI 335
TQA S+I
Sbjct: 62 KQTQANTSII 71
>UniRef50_Q07LP7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=2; Rhodopseudomonas palustris BisA53|Rep: Succinyl-CoA
synthetase, alpha subunit - Rhodopseudomonas palustris
(strain BisA53)
Length = 306
Score = 71.3 bits (167), Expect = 4e-12
Identities = 30/69 (43%), Positives = 49/69 (71%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
++L E +V+VQG TGKQG+F +++ GT++V G++PK+AG+ HLG PV+A+ + AM
Sbjct: 2 IILRKEHRVLVQGITGKQGSFWTEKMRSVGTRIVAGVNPKRAGETHLGIPVYASARAAMA 61
Query: 309 ATQAQASVI 335
T +V+
Sbjct: 62 ETPFDVAVM 70
>UniRef50_Q9YD40 Cluster: Succinyl-CoA synthetase alpha chain; n=4;
cellular organisms|Rep: Succinyl-CoA synthetase alpha
chain - Aeropyrum pernix
Length = 292
Score = 70.5 bits (165), Expect = 7e-12
Identities = 30/59 (50%), Positives = 46/59 (77%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AM 305
+++ SET+V+VQG TG++G+FH++ L+YGTKVV G++P K G E G PV+ +VK A+
Sbjct: 3 VLVDSETRVLVQGITGREGSFHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEAL 61
>UniRef50_Q18XG5 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=2; Desulfitobacterium hafniense|Rep:
Succinyl-CoA ligase [ADP-forming] subunit alpha -
Desulfitobacterium hafniense (strain DCB-2)
Length = 293
Score = 69.3 bits (162), Expect = 2e-11
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
L++ +T VIVQG TGKQG++H + L+YGTKVV G++P + G + G PV+ TV+ A
Sbjct: 3 LIINKDTHVIVQGGTGKQGSYHVKAMLEYGTKVVAGVTPGRGGNQVGGLPVYDTVREAKE 62
Query: 309 ATQAQASVI 335
+ AS+I
Sbjct: 63 RHKIDASLI 71
>UniRef50_Q2V0P6 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=10; cellular organisms|Rep: Succinyl-CoA ligase
[ADP-forming] subunit alpha - Pelotomaculum
thermopropionicum
Length = 290
Score = 66.9 bits (156), Expect = 8e-11
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+++ T+V+VQG TG QG FH++Q L YGTK+V G++P K G G PV+ +V+ A
Sbjct: 3 IIIDENTQVLVQGITGNQGVFHTRQMLAYGTKIVAGVTPGKGGATVEGIPVYNSVREACE 62
Query: 309 ATQAQASVI 335
+ ASV+
Sbjct: 63 NHRIDASVL 71
>UniRef50_P53400 Cluster: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor; n=34; cellular
organisms|Rep: Succinyl-CoA ligase [GDP-forming] subunit
alpha-2, mitochondrial precursor - Trichomonas vaginalis
Length = 309
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/69 (44%), Positives = 45/69 (65%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
L + +T+V++QG G QG +HS+ +YGTKVVG + PKKAG+ G P+F +K +
Sbjct: 15 LFIDKDTRVVIQGI-GNQGQYHSRLMREYGTKVVGAVHPKKAGKIIAGLPIFKNMKEVVK 73
Query: 309 ATQAQASVI 335
T A AS+I
Sbjct: 74 RTDANASLI 82
>UniRef50_Q18UM7 Cluster: CoA-binding; n=2; Desulfitobacterium
hafniense|Rep: CoA-binding - Desulfitobacterium
hafniense (strain DCB-2)
Length = 292
Score = 63.3 bits (147), Expect = 1e-09
Identities = 27/70 (38%), Positives = 48/70 (68%)
Frame = +3
Query: 126 NLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AM 305
++++ T V++QG TGK+G+F ++ A +YGT +V G++P K GQ+ G PV+ TV+ A+
Sbjct: 2 SIIIDHTTPVLIQGITGKEGSFWAKHAKNYGTHIVAGVTPGKEGQDVDGIPVYHTVRRAV 61
Query: 306 NATQAQASVI 335
+AS++
Sbjct: 62 QEHPIEASLL 71
>UniRef50_Q6LYN5 Cluster: Succinate--CoA ligase (ADP-forming); alpha
subunit; n=8; cellular organisms|Rep: Succinate--CoA
ligase (ADP-forming); alpha subunit - Methanococcus
maripaludis
Length = 288
Score = 60.5 bits (140), Expect = 7e-09
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
++L T+ IVQG TG QG FH++ L+ T ++ G++P K GQ+ G PV+ TV +
Sbjct: 3 ILLDENTRAIVQGITGNQGRFHTKNMLECKTNLLAGVTPGKGGQDVYGVPVYDTVLETVE 62
Query: 309 ATQAQASVI 335
A AS+I
Sbjct: 63 KYDANASLI 71
>UniRef50_Q2RLF6 Cluster: CoA-binding; n=3; Clostridia|Rep:
CoA-binding - Moorella thermoacetica (strain ATCC 39073)
Length = 298
Score = 58.4 bits (135), Expect = 3e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AM 305
+++ T V+VQG TG++G+ + +YGTKVV G SP K GQ G PV+ TVK A+
Sbjct: 3 ILIDRNTTVVVQGITGREGSLRAAYMKEYGTKVVAGTSPGKGGQTVAGIPVYHTVKEAV 61
>UniRef50_A7DNB4 Cluster: CoA-binding domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
CoA-binding domain protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 305
Score = 57.6 bits (133), Expect = 5e-08
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +3
Query: 153 VIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGK-PVFATVK*AMNATQAQAS 329
VIVQG TG G+ H++ + YGT VV G++P K GQ+ K P++ +++ A++AT A+ S
Sbjct: 22 VIVQGITGAYGSLHARNMIAYGTNVVAGVTPGKGGQKFDDKVPIYNSMQEAVDATNAKIS 81
Query: 330 VI 335
++
Sbjct: 82 IV 83
>UniRef50_A7I683 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Candidatus Methanoregula boonei 6A8|Rep:
Succinyl-CoA synthetase, alpha subunit - Methanoregula
boonei (strain 6A8)
Length = 292
Score = 56.4 bits (130), Expect = 1e-07
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +3
Query: 144 ETKVIVQGFTGKQGTFHSQQALDY-----GTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
+T +IV G TGKQG +H +Y G VV G++PKKAGQ G PV+ TVK A+
Sbjct: 7 KTGIIVTGATGKQGDYHIGLMNEYARQVGGRGVVAGVTPKKAGQSVHGVPVYDTVKDALK 66
Query: 309 ATQAQASVI 335
A ASVI
Sbjct: 67 EHDATASVI 75
>UniRef50_Q7U0Z0 Cluster: Succinyl-CoA ligase [ADP-forming] subunit
alpha; n=32; Actinobacteria (class)|Rep: Succinyl-CoA
ligase [ADP-forming] subunit alpha - Mycobacterium bovis
Length = 303
Score = 56.4 bits (130), Expect = 1e-07
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Frame = +3
Query: 117 TRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQ--EHLGK----- 275
T ++ L+ + KVIVQG TG + T H+ + L GT++VGG++ +KAG H K
Sbjct: 2 THMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLI 61
Query: 276 --PVFATVK*AMNATQAQASVI 335
PVF +V AM T A S+I
Sbjct: 62 KLPVFGSVAEAMEKTGADVSII 83
>UniRef50_A0RTT7 Cluster: Succinyl-CoA synthetase, alpha subunit;
n=1; Cenarchaeum symbiosum|Rep: Succinyl-CoA synthetase,
alpha subunit - Cenarchaeum symbiosum
Length = 304
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +3
Query: 153 VIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASV 332
V+VQG TGK G+ H++ +YGT + G++ ++ ++ G P++ + A+ AT AQ S
Sbjct: 22 VVVQGITGKFGSTHTRLMKEYGTNIAAGVTLREGAKDFEGIPLYGNIGEAVEATGAQISA 81
Query: 333 I 335
+
Sbjct: 82 M 82
>UniRef50_A7HMU3 Cluster: CoA-binding domain protein; n=2;
Thermotogaceae|Rep: CoA-binding domain protein -
Fervidobacterium nodosum Rt17-B1
Length = 285
Score = 44.8 bits (101), Expect = 4e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 141 SETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATV 293
S KV V G TG+ G++H+++ ++YGT +V G+S +E PV+ T+
Sbjct: 4 SNEKVCVYGITGRYGSYHTKKMIEYGTDIVCGVSKNNEFKEVHNVPVYNTL 54
>UniRef50_Q7SDJ1 Cluster: Putative uncharacterized protein
NCU09810.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU09810.1 - Neurospora crassa
Length = 646
Score = 44.4 bits (100), Expect = 5e-04
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +3
Query: 180 QGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASVI 335
Q T +++ +L +GTK+VGG+ P + G EHLG PV +V+ AM + A+ I
Sbjct: 29 QATANAKDSLAWGTKIVGGVIPGRTG-EHLGLPVLPSVRQAMEYLKPDATGI 79
>UniRef50_Q8YQC0 Cluster: Succinyl-CoA synthetase alpha chain; n=6;
Cyanobacteria|Rep: Succinyl-CoA synthetase alpha chain -
Anabaena sp. (strain PCC 7120)
Length = 293
Score = 43.2 bits (97), Expect = 0.001
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +3
Query: 135 LTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK 296
LT ++KVI+QGF H Q YGT +V G+ P GQE PVF V+
Sbjct: 3 LTPDSKVIIQGFHEFISENHIAQMKAYGTNLVAGVQPGYGGQELYHLPVFDLVE 56
>UniRef50_A7ENF5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 580
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/35 (48%), Positives = 28/35 (80%)
Frame = +3
Query: 192 HSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK 296
++++++++GT +VGG++P K G EHLG PV TVK
Sbjct: 4 NAKESIEWGTNIVGGVTPGKNG-EHLGLPVLPTVK 37
>UniRef50_O67729 Cluster: Succinyl-CoA ligase alpha subunit; n=4;
Bacteria|Rep: Succinyl-CoA ligase alpha subunit -
Aquifex aeolicus
Length = 368
Score = 39.9 bits (89), Expect = 0.011
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 135 LTSETKVIVQGFTGKQGT--FHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMN 308
L +T++IV G TG++ + +AL Y + G++P K G E G PVF TVK A++
Sbjct: 32 LNDKTRIIVVGITGREASQVVTESEAL-YPGFIKVGVTPGKGGTEVAGVPVFNTVKEALS 90
Query: 309 ATQAQ 323
+ + +
Sbjct: 91 SPEGK 95
>UniRef50_Q968N3 Cluster: Succinyl CoA synthetase alpha subunit;
n=1; Tritrichomonas foetus|Rep: Succinyl CoA synthetase
alpha subunit - Tritrichomonas foetus (Trichomonas
foetus)
Length = 46
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKV 227
L L+ +TKV++QG GKQG FH + +YGT V
Sbjct: 15 LFLSKDTKVVIQGI-GKQGQFHGRLMAEYGTNV 46
>UniRef50_UPI000023DDE4 Cluster: hypothetical protein FG07898.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07898.1 - Gibberella zeae PH-1
Length = 320
Score = 37.9 bits (84), Expect = 0.044
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 180 QGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASVI 335
+ T ++Q + YGTKVVGG++ HLG P+F +++ A S +
Sbjct: 9 KATKNAQDTIAYGTKVVGGVTKGPKVDTHLGLPLFGSMEKAAEELNPDVSAV 60
>UniRef50_Q05FP1 Cluster: Succinyl-CoA synthetase alpha subunit;
n=1; Candidatus Carsonella ruddii PV|Rep: Succinyl-CoA
synthetase alpha subunit - Carsonella ruddii (strain PV)
Length = 274
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +3
Query: 153 VIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATVK*AMNATQAQASV 332
++ G TGK G H++ ++++GTK+ GI+ K G P++++ A+ + + SV
Sbjct: 6 ILSYGITGKFGFQHTKVSINFGTKIKCGINNSKNGGIVFHIPIYSSAIKAVKSNNCKISV 65
Query: 333 I 335
+
Sbjct: 66 L 66
>UniRef50_P74286 Cluster: Succinyl-CoA synthetase; n=3;
Chroococcales|Rep: Succinyl-CoA synthetase -
Synechocystis sp. (strain PCC 6803)
Length = 302
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 144 ETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFATV 293
E+KV++QG G + +Q GTK+V G+SP G+ PVF V
Sbjct: 6 ESKVLLQGVHHPLGLTYLEQMRSCGTKLVAGVSPGHGGELIGDLPVFDLV 55
>UniRef50_A4ALC7 Cluster: Putative uncharacterized protein; n=5;
Bacteria|Rep: Putative uncharacterized protein - marine
actinobacterium PHSC20C1
Length = 246
Score = 33.9 bits (74), Expect = 0.72
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 TSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQ-EHLG 272
T +V + G +GK G + + AL++G +VVG PK + +H G
Sbjct: 13 TPRQRVCIVGISGKLGQYLAAHALEHGYEVVGVCRPKSVAKLDHFG 58
>UniRef50_UPI0000D5572D Cluster: PREDICTED: similar to CG6493-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG6493-PA - Tribolium castaneum
Length = 1623
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 102 NPYSETRKNLVLTSETKVIVQGFTGKQ-GTFHSQQALDYGTKV 227
NPY++TR+NL +T + + ++ F K+ S L+ G +
Sbjct: 419 NPYNDTRENLYITKKNREVLNSFVSKEINVLVSSNVLEEGVDI 461
>UniRef50_Q54VV3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1142
Score = 32.3 bits (70), Expect = 2.2
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = -3
Query: 236 TTNNLSSIVQGLLAMECTLFTSEPLYNNFSFTREN*VFSSFRIRVT----TCKSDIAEFE 69
TT +S I ++ + +L S PLY N+SF + N ++FR T TC + I E
Sbjct: 888 TTYEISIIELNEISFDGSLVISYPLYKNWSFMKNNTDLNTFRFNQTLKNNTC-TIIYTVE 946
Query: 68 SIFEPRKNLDWNRHCFIRKK 9
I K+ + F KK
Sbjct: 947 EIKSNEKSFTFGMASFTLKK 966
>UniRef50_Q8YKE0 Cluster: Alr7358 protein; n=3; Nostocaceae|Rep:
Alr7358 protein - Anabaena sp. (strain PCC 7120)
Length = 118
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 59 QKWTQTQQCQICMW*PLF*NSKKLSSHE*N*SYCTRVHW 175
Q+WT +Q ++ W PLF E Y +RVHW
Sbjct: 66 QRWTLEEQLELLDWHPLFTGKCPQCGAEYERDYISRVHW 104
>UniRef50_Q0S9J9 Cluster: Probable Zn-binding oxidoreductase; n=1;
Rhodococcus sp. RHA1|Rep: Probable Zn-binding
oxidoreductase - Rhodococcus sp. (strain RHA1)
Length = 300
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 129 LVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPK 248
L L S ++V G +G GT +Q ALD G V+G S K
Sbjct: 134 LKLKSGETLLVNGASGAVGTLAAQLALDSGVTVIGTASEK 173
>UniRef50_A7AX02 Cluster: Ankyrin repeat domain containing protein;
n=1; Babesia bovis|Rep: Ankyrin repeat domain containing
protein - Babesia bovis
Length = 1165
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 127 T*FSRVKLKLLYKGSLVNRVHSIASRPWTMELR 225
T F+++ LK +GSLV R+ A+ PW+ME R
Sbjct: 146 TMFTKIALK---QGSLVMRIQPFATSPWSMETR 175
>UniRef50_A5K4M7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 531
Score = 31.1 bits (67), Expect = 5.1
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 16 LIKQWRFQSKFFLGSKMDSNSAMSDLHVVTLILKLEKT*FSRVKLKLLYKGSLVNRVHSI 195
LIK+ + ++ + +SNS++ D V +ILK + ++ L K L+ H +
Sbjct: 118 LIKKVLLKMNRYVQQRSNSNSSVDDYDEVGIILKKHNISYVYIQNVLNGKDKLIRYSHFL 177
Query: 196 AS-RPWTMELRLLVVSHQ---KKQDKNILEN 276
+P + LR + + K+ KNIL++
Sbjct: 178 QKYKPTVLSLRRFITDDEEIKKELHKNILQS 208
>UniRef50_Q2L6X8 Cluster: Patterned expression site protein 22,
isoform b; n=4; Caenorhabditis|Rep: Patterned expression
site protein 22, isoform b - Caenorhabditis elegans
Length = 777
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 236 TTNNLSSIVQGLLAMECTLFTS 171
T NNLS IV GLL + C L TS
Sbjct: 579 TINNLSLIVSGLLTLACPLLTS 600
>UniRef50_Q5L6J2 Cluster: Polymorphic outer membrane protein; n=3;
Chlamydophila|Rep: Polymorphic outer membrane protein -
Chlamydophila abortus
Length = 1378
Score = 30.3 bits (65), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 102 NPYSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKP 278
N S LVL+S ++V FT K+G S +D GT ++ ++P G + P
Sbjct: 832 NDVSLEAGTLVLSSGAGLLVDSFTQKEG---SLIVMDGGTSIITNVTPASEGLQSRSTP 887
>UniRef50_Q1JIU6 Cluster: CoA binding protein; n=45;
Streptococcaceae|Rep: CoA binding protein -
Streptococcus pyogenes serotype M2 (strain MGAS10270)
Length = 151
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 102 NPYSETRKNLVLTSETKVIV----QGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHL 269
NP + K + +++T +V + T G QA+DY +++ ++PK AGQ L
Sbjct: 7 NPSEDVLKAYLESAKTIAVVGLSDRKDTAAYGVAKFMQAMDY--RIIP-VNPKLAGQLIL 63
Query: 270 GKPVFATVK 296
G+ V+A++K
Sbjct: 64 GEKVYASIK 72
>UniRef50_A5G1T4 Cluster: PpiC-type peptidyl-prolyl cis-trans
isomerase precursor; n=1; Acidiphilium cryptum JF-5|Rep:
PpiC-type peptidyl-prolyl cis-trans isomerase precursor
- Acidiphilium cryptum (strain JF-5)
Length = 427
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 172 VNPCTITLVSLV-RTKFFRVSE*GLPHANLTLLSLSPFLNRERIWTGTAIVLLEKNLV 2
VN IT + RT+ F +S GLP + TL L P + RE I + +E+N V
Sbjct: 35 VNGTVITNADVAARTRLFALSA-GLPTTSATLQRLKPQITRELIDQSLQLQAIERNKV 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 304,326,851
Number of Sequences: 1657284
Number of extensions: 5229734
Number of successful extensions: 14217
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 14009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14210
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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