Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M01
         (337 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   1.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   3.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   3.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   4.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   6.0  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 21 KTMAVPVQILSRFKNGL 71
          K++++P QIL+ FK+ L
Sbjct: 17 KSLSIPQQILNEFKSTL 33


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 215 IVQGLLAMECTLFTSEPLYNNFSFTREN 132
           ++ G   +    F ++PL   F  TR+N
Sbjct: 53  LIYGYAGINAETFKAQPLNELFDVTRDN 80


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 31  RFQSKFFLGSKMDSNSAMSDLH 96
           + +  FF+  K  + SA+ DLH
Sbjct: 218 QIRGTFFVSHKYTNYSAVQDLH 239


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 31  RFQSKFFLGSKMDSNSAMSDLH 96
           + +  FF+  K  + SA+ DLH
Sbjct: 225 QIRGTFFVSHKYTNYSAVQDLH 246


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 193 WNVPCLPVNPCTITLVSLVRTKFFR 119
           W +  L + P   TL++ V   ++R
Sbjct: 379 WGILVLIIAPLIATLIATVTVNYYR 403


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 3   TRFFSNKTMAVPVQILSRF 59
           T FF N+T  VP+ ++  F
Sbjct: 186 TLFFFNRTFGVPIFLVLVF 204


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 198 QQALDYGTKVVGGI 239
           Q  + +GT +VGGI
Sbjct: 209 QATVSFGTNLVGGI 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,787
Number of Sequences: 336
Number of extensions: 1384
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)