Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M01
         (337 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A synth...   103   2e-22
CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.              103   2e-22
BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.      103   2e-22
AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.             103   2e-22
AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase...   101   4e-22

>Z68204-1|CAA92426.1|  132|Homo sapiens succinyl coenzyme A
           synthetase protein.
          Length = 132

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 58/76 (76%)
 Frame = +3

Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
           Y+ +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K GQ HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 288 TVK*AMNATQAQASVI 335
           TVK A   T A ASVI
Sbjct: 90  TVKEAKEQTGATASVI 105


>CR457139-1|CAG33420.1|  333|Homo sapiens SUCLG1 protein.
          Length = 333

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 58/76 (76%)
 Frame = +3

Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
           Y+ +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K GQ HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 288 TVK*AMNATQAQASVI 335
           TVK A   T A ASVI
Sbjct: 90  TVKEAKEQTGATASVI 105


>BC000504-1|AAH00504.1|  333|Homo sapiens SUCLG1 protein protein.
          Length = 333

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 58/76 (76%)
 Frame = +3

Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
           Y+ +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K GQ HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 288 TVK*AMNATQAQASVI 335
           TVK A   T A ASVI
Sbjct: 90  TVKEAKEQTGATASVI 105


>AC096770-1|AAY24107.1|  333|Homo sapiens unknown protein.
          Length = 333

 Score =  103 bits (246), Expect = 2e-22
 Identities = 49/76 (64%), Positives = 58/76 (76%)
 Frame = +3

Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
           Y+ +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG +P K GQ HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFN 89

Query: 288 TVK*AMNATQAQASVI 335
           TVK A   T A ASVI
Sbjct: 90  TVKEAKEQTGATASVI 105


>AF104921-1|AAD17940.2|  333|Homo sapiens succinyl-CoA synthetase
           alpha subunit protein.
          Length = 333

 Score =  101 bits (243), Expect = 4e-22
 Identities = 49/76 (64%), Positives = 57/76 (75%)
 Frame = +3

Query: 108 YSETRKNLVLTSETKVIVQGFTGKQGTFHSQQALDYGTKVVGGISPKKAGQEHLGKPVFA 287
           Y+ +R++L +   TK+I QGFTGKQGTFHSQQAL+YGTK+VGG  P K GQ HLG PVF 
Sbjct: 30  YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTLPGKGGQTHLGLPVFN 89

Query: 288 TVK*AMNATQAQASVI 335
           TVK A   T A ASVI
Sbjct: 90  TVKEAKEQTGATASVI 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,268,805
Number of Sequences: 237096
Number of extensions: 843647
Number of successful extensions: 1472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)