Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L24
(266 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0569 + 5056261-5057712 31 0.17
05_01_0574 + 5092209-5092963,5103988-5104654 30 0.29
11_01_0763 + 6402901-6403971,6404581-6404826 28 0.89
01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010 28 0.89
12_02_0094 - 13556672-13556893,13557335-13557478 28 1.2
11_06_0636 - 25711965-25712232,25712438-25712502,25713033-257132... 27 1.6
06_03_0789 + 24630552-24631171,24631240-24631279,24632422-246324... 27 2.1
04_03_0565 + 17207582-17207811,17208026-17208320 27 2.1
03_02_0721 - 10677286-10678018,10679293-10679373,10682516-106826... 27 2.1
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 2.7
04_04_0384 - 24853689-24853727,24853802-24853861,24854311-248543... 27 2.7
02_01_0621 + 4656067-4656414 27 2.7
07_01_0574 + 4252087-4253973 26 3.6
05_05_0177 - 22993844-22994617 26 3.6
05_04_0416 - 21088217-21088705 26 3.6
04_04_0687 - 27262742-27262784,27263429-27263584,27263698-272637... 26 3.6
03_05_0130 - 21104668-21105030,21106045-21106203,21106265-21107032 26 3.6
03_03_0091 - 14371528-14372661 26 3.6
02_02_0724 + 13349419-13349641,13349880-13349974,13350366-133506... 26 3.6
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 26 3.6
01_06_1103 - 34543915-34543955,34544069-34544137,34544294-345443... 26 3.6
10_05_0064 + 8712503-8712507,8714248-8714358,8715018-8715630 26 4.8
08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194,623... 26 4.8
07_01_0362 - 2667031-2667090,2667182-2667426,2667749-2669471,266... 26 4.8
06_01_0433 - 3078576-3078780,3078797-3078951,3079782-3079821,307... 26 4.8
04_03_0368 + 15004949-15005659,15005789-15005848 26 4.8
03_02_0223 + 6548810-6549025,6549159-6549211,6549457-6549492,654... 26 4.8
08_01_1057 + 10761508-10761758,10762155-10762267,10762681-107627... 25 6.3
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 25 6.3
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 25 6.3
02_04_0650 + 24728700-24728725,24729582-24729660,24729802-247298... 25 6.3
11_01_0555 - 4388977-4389528 25 8.3
10_08_0102 + 14810293-14811345,14811989-14812108,14812745-148127... 25 8.3
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 25 8.3
07_03_0604 + 19903654-19904598 25 8.3
05_07_0327 - 29275916-29276017,29276101-29276283,29276392-292764... 25 8.3
05_01_0426 + 3364341-3364713,3364823-3364963,3365389-3365510,336... 25 8.3
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 25 8.3
04_01_0197 + 2323790-2324098,2324145-2324774 25 8.3
01_02_0036 + 10468636-10468938,10469014-10469109,10469247-104694... 25 8.3
>05_01_0569 + 5056261-5057712
Length = 483
Score = 30.7 bits (66), Expect = 0.17
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 103 ARTRTLANGSGWWLASGDKLSRRHPMYRLGYSSYPLSRWFVLRH*ETDL 249
A++ A L DKL + P++ +G +SYPL+ W ++ + + +L
Sbjct: 319 AKSALYARCEAGLLLGHDKLGWQQPLWLVGGASYPLTSWMLVPYTQPNL 367
>05_01_0574 + 5092209-5092963,5103988-5104654
Length = 473
Score = 29.9 bits (64), Expect = 0.29
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 103 ARTRTLANGSGWWLASGDKLSRRHPMYRLGYSSYPLSRWFVL 228
A++ A L DKL + P++ +G +SYPL+ W ++
Sbjct: 311 AKSALYARCEAGLLLGHDKLGWQQPLWLVGGASYPLTSWMLV 352
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 28.3 bits (60), Expect = 0.89
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 89 GTRAMQGQGRWRMVPVGGW--RVATSCRDVIQCTASGIQAIRC 211
G QG+ RWR V GG ATS R + + A+ + A RC
Sbjct: 58 GAATHQGRRRWRGVGSGGGGDGAATSRRRLARQPAAAVAAARC 100
>01_01_1052 + 8297105-8297422,8298978-8299310,8299820-8301010
Length = 613
Score = 28.3 bits (60), Expect = 0.89
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 81 ESLEQELCKDKDAGEWFRLVAGEWRQAVATSSNVPPRVFKLSVVPLV 221
E + L D+D F+ +AGE+RQ V SS V + ++ LV
Sbjct: 440 EKMRAALGMDQDMFNAFKEIAGEYRQGVINSSEYLSYVKQFGLLHLV 486
>12_02_0094 - 13556672-13556893,13557335-13557478
Length = 121
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 153 ATRQPPTGTIRQRPCPCIALVPDSRLSSLF 64
AT +P TG + P P + L DSR F
Sbjct: 15 ATHEPATGWVGMHPAPRLLLADDSRCPDRF 44
>11_06_0636 -
25711965-25712232,25712438-25712502,25713033-25713296,
25713405-25713854
Length = 348
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 40 TDGGDKLRKQ*RKTRVWNKSYARTRTLANGSGWWLAS 150
+D G +L R RV N + + + LAN S WW S
Sbjct: 193 SDHGRRLNSSVRSLRVMNPALSHHQ-LANNSAWWKQS 228
>06_03_0789 +
24630552-24631171,24631240-24631279,24632422-24632486,
24632615-24632660,24633222-24633314,24633736-24633855,
24633931-24633982,24634051-24634123,24634350-24634416,
24634670-24634720,24635026-24635118,24635207-24635308
Length = 473
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 62 GNSEERRESGTRAMQGQGRWRMVPVG 139
G+ RRES TRAMQG R++ G
Sbjct: 295 GSGRARRESATRAMQGWHSQRLLGNG 320
>04_03_0565 + 17207582-17207811,17208026-17208320
Length = 174
Score = 27.1 bits (57), Expect = 2.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 124 NGSGWWLASGDK 159
+G GWWL SGD+
Sbjct: 77 SGGGWWLVSGDR 88
>03_02_0721 -
10677286-10678018,10679293-10679373,10682516-10682645,
10682969-10683101
Length = 358
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +2
Query: 17 RLRCC*WAPMAATS*GNSEERRESGTRAMQGQGRWRMVP--VGGWRVATSCR 166
R CC + E+ + +G A G+G WR +P G R SCR
Sbjct: 3 RAPCCEKVGLKRGRWTTEEDEKLAGYIAKHGEGSWRSLPKNAGLLRCGKSCR 54
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 60 EETVKKDESLEQELCKDKDA 119
E +K+ L QE+C DKDA
Sbjct: 709 ESIIKRKIKLHQEMCNDKDA 728
>04_04_0384 -
24853689-24853727,24853802-24853861,24854311-24854357,
24854487-24854565,24855184-24855279,24855645-24855714,
24855787-24855857,24856010-24856105,24856501-24856628,
24856733-24856853
Length = 268
Score = 26.6 bits (56), Expect = 2.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -3
Query: 171 TSRQLVATRQPPTGTIRQRPCPCIALVPDSRLSSLFPQLVAAIGAHQQ 28
+SRQ A + T + P P AL +R S + P +VAA G HQ+
Sbjct: 22 SSRQSDAPLRAATVSFPYSPRPA-ALAAGARASRVSPVVVAAGGGHQR 68
>02_01_0621 + 4656067-4656414
Length = 115
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 55 CRRHRCPSATAQANKSLV 2
CR HR P+ATA+A ++V
Sbjct: 44 CRLHRSPAATAKAKAAIV 61
>07_01_0574 + 4252087-4253973
Length = 628
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 79 TRVWNKSYARTRTLANGSGWWLASGD-KLSRRHPMYRLGYSSYPLSRW 219
T VW K+ + LAN S W+L S D R P++ Y L W
Sbjct: 318 TWVWLKAAQKRDWLANLS-WFLFSSDIGWPERRPLWSSSIGQYSLLSW 364
>05_05_0177 - 22993844-22994617
Length = 257
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 159 AVATSSNVPPRVFKLSVVPLVCSSTLRNRLATGKRQ 266
A+++SS PPRVF V LRN + G++Q
Sbjct: 54 ALSSSSPSPPRVFHRIRVAACALRVLRNLQSAGQQQ 89
>05_04_0416 - 21088217-21088705
Length = 162
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 109 TRTLANGSGWWLASGDKLSRRHPMYR 186
T LA G GW LA+ K RR P R
Sbjct: 53 TPDLAGGGGWRLAAAGKGGRRVPRTR 78
>04_04_0687 -
27262742-27262784,27263429-27263584,27263698-27263783,
27263881-27264188,27265337-27265455,27265989-27266075,
27266440-27266546
Length = 301
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +3
Query: 33 DGHRWRRQAEETVKKD--ESLEQELCK 107
DG++WR+ ++ VK QELCK
Sbjct: 269 DGYKWRKYGQKVVKNSLHPRFLQELCK 295
>03_05_0130 - 21104668-21105030,21106045-21106203,21106265-21107032
Length = 429
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 174 MTSRQLVATRQPPTGTIRQRPCPCIALVPDSRLSSLFPQLVAAIGA 37
+ S ++A+ PP T+ RP P P +R SS +L AA+G+
Sbjct: 16 LPSSPILASHPPPLSTVACRPVP-----PPNRFSSA-RRLAAAVGS 55
>03_03_0091 - 14371528-14372661
Length = 377
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 38 APMAATS*GNSEERRESGTRAMQGQGRWRMVPVGGWRVATS 160
A +A + N E R S TRA Q +GR R AT+
Sbjct: 203 AAVAVPAPANGEVRSPSSTRAQQRRGRRRRTAAAAAATATA 243
>02_02_0724 +
13349419-13349641,13349880-13349974,13350366-13350653,
13352838-13352963,13353045-13353204,13354142-13354190,
13354502-13354772,13356071-13356196,13357076-13357231,
13357815-13358058,13358181-13358627,13359348-13359478
Length = 771
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 72 KKDESLEQELCKDKDAGEWFRLVAGEWRQAVATSSNVP 185
+KD++ + E D W+R+ + A+ SS+VP
Sbjct: 296 RKDQTPDSESDSDSPIESWYRISGSQLLAAMDLSSSVP 333
>02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 158 SCRDVIQCTASGIQAIRCPAGLFFDIEKQ 244
S R +I GI +R PA +F+D+ Q
Sbjct: 948 SSRILITTDLRGIDVLRAPAAIFYDLPTQ 976
>01_06_1103 -
34543915-34543955,34544069-34544137,34544294-34544395,
34545603-34545708,34545998-34546079,34546850-34547142
Length = 230
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 83 LVFLHCFLSLSPPSVPISNSAGEQ 12
L+ LHCFLSL +P + A E+
Sbjct: 16 LLLLHCFLSLQTARLPRDDWASEE 39
>10_05_0064 + 8712503-8712507,8714248-8714358,8715018-8715630
Length = 242
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 33 DGHRWRRQAEETVKKDESLEQELCK 107
DGH WR+ E+ + K+ S + CK
Sbjct: 20 DGHLWRKYGEKKI-KNSSFPRRWCK 43
>08_01_0705 +
6231220-6231390,6231900-6231954,6232043-6232194,
6232252-6232335,6232614-6232797,6232885-6232988,
6233109-6233183,6233366-6233405,6233495-6233577,
6233687-6233764,6233868-6234011,6234093-6234160,
6234831-6234945,6235045-6235201,6235311-6235408
Length = 535
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 103 ARTRTLANGSGWWLASGDKLSRRHPMYRLGYSSYPLSRW 219
AR L S W +A+G L+ P+Y G PLS +
Sbjct: 475 ARLMLLRLHSRWVVAAGGFLTHSVPLYMTGVEVSPLSSY 513
>07_01_0362 -
2667031-2667090,2667182-2667426,2667749-2669471,
2669578-2669921,2670544-2670667,2671350-2671599,
2672486-2672571
Length = 943
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 59 SLSPPSVPISNSAGEQEP 6
S SPP+ P+++SAG P
Sbjct: 19 SASPPATPVASSAGASSP 36
>06_01_0433 -
3078576-3078780,3078797-3078951,3079782-3079821,
3079957-3080009,3080091-3080199,3080324-3080448,
3081112-3081201,3081280-3081342,3081453-3081544,
3081641-3081722,3081913-3082086,3082183-3082264,
3083100-3083224,3083312-3083389,3084047-3084402,
3085311-3085608
Length = 708
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 159 LVATRQPPTGTIRQRPCPCIALVPDSRLSSLFPQL 55
LV T PP T P P +PDS + + P L
Sbjct: 64 LVPTSTPPAPTQSPAPAPTPPPLPDSGVGEIEPDL 98
>04_03_0368 + 15004949-15005659,15005789-15005848
Length = 256
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +2
Query: 71 EERRESGTRAMQGQG--RWRMVPVGGWR 148
E RR SG + G+G RWR + WR
Sbjct: 77 EARRRSGRQIRHGRGEARWRTTDLEPWR 104
>03_02_0223 +
6548810-6549025,6549159-6549211,6549457-6549492,
6549786-6549933,6550078-6550185,6550757-6550824,
6551846-6551969,6552067-6552213,6552545-6552805,
6552885-6553169,6553796-6553939,6554565-6554915,
6555405-6555470,6555598-6555768
Length = 725
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 147 EWRQAVATSSNVPPRVFKLSVVPLVC 224
E+ Q T+SNVP KL+V L+C
Sbjct: 642 EFEQLQKTTSNVPTNKVKLAVRLLIC 667
>08_01_1057 +
10761508-10761758,10762155-10762267,10762681-10762733,
10763892-10764248
Length = 257
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 42 RWRRQAEETVKKDESLEQELCKDKDA 119
R +AEE KKDE LE+E + D+
Sbjct: 136 RMEAEAEEKKKKDEELEKEKQLEADS 161
>06_03_0742 + 24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 30 ADGHRWRRQAEETVKKDESLEQELCKDKDA 119
AD +W+RQ + ++ D+ E+E D D+
Sbjct: 1517 ADAEKWKRQEIDEMEYDDDAEKEEGFDMDS 1546
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 65 FLSLSPPSVPISNSAGEQE 9
F+ L PS+P +N+ GEQE
Sbjct: 263 FIPLGIPSLPENNTTGEQE 281
>02_04_0650 +
24728700-24728725,24729582-24729660,24729802-24729889,
24730216-24730297,24731083-24731278,24731432-24731816,
24733332-24734428,24734621-24734886,24735565-24735631,
24735722-24735772,24736033-24736123,24736239-24736345
Length = 844
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +3
Query: 96 ELCKDKDAGEWFRLVAGEW 152
E C+DK EWF A W
Sbjct: 802 EFCRDKTRNEWFYAAALVW 820
>11_01_0555 - 4388977-4389528
Length = 183
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 99 LCKDKDAGEWFRLVAGEWRQAVA 167
LC D+D G W R +A E R A
Sbjct: 61 LCGDEDGGFWCRYIAFEARHGGA 83
>10_08_0102 +
14810293-14811345,14811989-14812108,14812745-14812792,
14812886-14813006,14814073-14814129,14815109-14815217,
14815298-14815523,14815608-14815724,14816041-14816119,
14816303-14816325,14816698-14816742,14816872-14817030
Length = 718
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 174 MTSRQLVATRQPPTGTIRQRPCPCIALVPDSRLSS 70
++ +++++TR P G + + P CI PDS + S
Sbjct: 570 ISGQRIISTR--PFGDLMEDPLACILGSPDSNMES 602
>09_06_0320 -
22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 45 WRRQAEETVKKDESLEQELCKD-KDAGEWFRLVAGEWRQAVATSSNVPP 188
W +QAEET + +L LC D A + L G A A +PP
Sbjct: 71 WAQQAEETYQLQLALALRLCADAASAADPAFLDPGHSATATAGPFPLPP 119
>07_03_0604 + 19903654-19904598
Length = 314
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 77 RRESGTRAMQGQGRWRMVPVG 139
RR G R +GQGR VP G
Sbjct: 119 RRRHGRRGEEGQGRRPRVPAG 139
>05_07_0327 -
29275916-29276017,29276101-29276283,29276392-29276453,
29276590-29276671,29276922-29276987,29277297-29277359,
29277466-29277570,29277678-29277887,29277988-29278103,
29278875-29279082
Length = 398
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 68 SEERRESGTRAMQGQGRW 121
++E R+SG R G GRW
Sbjct: 374 AQEMRQSGKRPAAGAGRW 391
>05_01_0426 +
3364341-3364713,3364823-3364963,3365389-3365510,
3365939-3366202,3366289-3366419,3366819-3367026,
3367121-3367186,3367276-3367353,3368038-3368079
Length = 474
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 192 PEAVHWMTSRQLVATRQPPTGTIRQRPC 109
PE + SR L T PPT +R+ C
Sbjct: 92 PEGHGTLASRPLPPTHPPPTPRVRKSSC 119
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 232 VEEQTSGTTDSLNTRGGTLDDVATACRH 149
++ SG+T SL +G LDD+ H
Sbjct: 228 LDMHNSGSTKSLGLKGVLLDDIKAQAEH 255
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 51 RQAEETVKKDESLEQELCKDKDAGEWFRLVAGEW 152
R A E V++DE +++ D + RLV+G++
Sbjct: 186 RYAPEDVREDEEKQEKFLAGMDPELFVRLVSGDY 219
>01_02_0036 +
10468636-10468938,10469014-10469109,10469247-10469453,
10470762-10471097,10471469-10471582,10471634-10471639
Length = 353
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 62 GNSEERRESGTRAMQGQGRWR 124
G EE E+G +++G G WR
Sbjct: 24 GGEEEEEETGRLSLRGGGFWR 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,498,514
Number of Sequences: 37544
Number of extensions: 175077
Number of successful extensions: 779
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 67
effective length of database: 12,277,900
effective search space used: 257835900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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