Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L24
(266 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 33 0.028
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 33 0.028
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 31 0.085
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 30 0.20
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 0.60
AF000266-2|AAC71171.2| 268|Caenorhabditis elegans Hypothetical ... 28 0.79
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 28 1.0
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 27 1.4
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 27 1.8
Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 26 3.2
U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying defe... 26 3.2
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 26 3.2
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 26 3.2
AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase... 26 3.2
AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase... 26 3.2
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z68760-7|CAE17825.1| 117|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 25 7.4
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 25 7.4
U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical pr... 25 7.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 25 7.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 25 7.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 25 7.4
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 25 7.4
U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family pr... 25 7.4
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 25 7.4
AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPas... 25 7.4
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 25 7.4
AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical ... 25 7.4
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 25 7.4
AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical ... 25 7.4
Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 25 9.7
AL132943-11|CAB61047.2| 97|Caenorhabditis elegans Hypothetical... 25 9.7
AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical... 25 9.7
AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical ... 25 9.7
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.028
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 179 CTASGIQAIRCPAGLFFDIEKQTCDWK 259
CT + + + CP LF+D + Q C WK
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWK 184
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +2
Query: 170 VIQCTASGIQAIRCPAGLFFDIEKQTCDWKE 262
V+ C + CP+ L F+ + CD+ +
Sbjct: 419 VLSCQNGHVDIFECPSSLVFNDQSLICDYPQ 449
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTCDW 256
+ C+ + + CPA L F+ CDW
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDW 292
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTCDWK 259
+ C+ + + CPA L ++ CDW+
Sbjct: 42 LTCSGGIARIMDCPADLIYNEPLLICDWR 70
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.028
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 179 CTASGIQAIRCPAGLFFDIEKQTCDWK 259
CT + + + CP LF+D + Q C WK
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWK 184
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +2
Query: 170 VIQCTASGIQAIRCPAGLFFDIEKQTCDWKE 262
V+ C + CP+ L F+ + CD+ +
Sbjct: 419 VLSCQNGHVDIFECPSSLVFNDQSLICDYPQ 449
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTCDW 256
+ C+ + + CPA L F+ CDW
Sbjct: 265 LTCSGGIARIMDCPASLVFNPTILVCDW 292
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTCDWK 259
+ C+ + + CPA L ++ CDW+
Sbjct: 42 LTCSGGIARIMDCPADLIYNEPLLICDWR 70
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 31.5 bits (68), Expect = 0.085
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 161 CRDV-IQCTASGIQAIRCPAGLFFDIEKQTCDWKE 262
C D I C RCPAGLF+ CD+KE
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKE 834
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 161 CRDVIQCTASG-IQAIRCPAGLFFDIEKQTCDW 256
C+ V A+G + A CPA L F+ CD+
Sbjct: 587 CKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical
protein H02I12.1 protein.
Length = 1319
Score = 30.3 bits (65), Expect = 0.20
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 152 ATSCRDVI-QCTASGIQAIRCPAGLFFDIEKQTCDWK 259
A C DV C+ + + CP G F+I +Q+CD++
Sbjct: 202 ADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQ 238
Score = 27.9 bits (59), Expect = 1.0
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTCDWKE 262
IQC+ S C L+FD Q+C +++
Sbjct: 802 IQCSDSAASVRECEGSLYFDERSQSCRFRD 831
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 152 ATSCRDVIQCTASGIQAIRCPAGLFFDIEKQTCDWKEA 265
A +C +C + CP+G F+ CDW A
Sbjct: 1255 ANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSA 1292
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 173 IQCTASGIQAIRCPAGLFFDIEKQTC 250
I C A G +CP L F+ Q C
Sbjct: 116 ISCVAGGAYMAKCPDSLVFNERTQDC 141
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.7 bits (61), Expect = 0.60
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 253 VASLFLNVEEQTSGTTDSLNTRGGTLDDVATACRHSPA 140
V S+F +E + +D L G L DVA C H P+
Sbjct: 1978 VTSVFELLELENDDRSDILQMEGAELADVARFCNHYPS 2015
>AF000266-2|AAC71171.2| 268|Caenorhabditis elegans Hypothetical
protein W08F4.6 protein.
Length = 268
Score = 28.3 bits (60), Expect = 0.79
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 104 QGQGRWRMVPVGGWRVATSCRDVIQC 181
QG W+++P GW + C V C
Sbjct: 113 QGSKGWQVIPCQGWNIIDGCDGVGSC 138
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 131 PVGGWRVATSCRDVIQCTASGIQAIRCP 214
P+ + SC + QCTA G Q + CP
Sbjct: 380 PITSCAASVSCANDFQCTAIGSQHLCCP 407
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 155 TSCRDVIQCTASGIQAIR-CPAGLFFDIEKQTCDW 256
+ C +V + GI R CPA L F+ +CDW
Sbjct: 188 SECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDW 222
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 134 VGGWRVATSCRDVIQCTASGIQAIR-CPAGLFFDIEKQTCDWK 259
V G+ C +GI + CP GL F + Q CD++
Sbjct: 242 VDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYE 284
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 158 SCRDVIQCTASGIQAIR-CPAGLFFDIEKQTCD 253
+C++ QC ASG+ R C G +D K TCD
Sbjct: 171 NCKNFYQC-ASGLWTQRSCGEGTIWDQHKLTCD 202
>Z73426-6|CAA97796.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 75 KDESLEQELCKDKDAGEWFRLVAGEWRQAVATSSNVPPRVFKLSVVPLVCSSTLRN 242
K ES+ + K+K+ + V+ E A+ +SN P+V+ + L+ + T++N
Sbjct: 742 KRESIRNKQKKEKEQYSAYPYVSEEEEVAIFENSNGNPQVYGRELGRLLFAETIKN 797
>Z73425-9|CAA97791.2| 853|Caenorhabditis elegans Hypothetical
protein F12F6.1 protein.
Length = 853
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 75 KDESLEQELCKDKDAGEWFRLVAGEWRQAVATSSNVPPRVFKLSVVPLVCSSTLRN 242
K ES+ + K+K+ + V+ E A+ +SN P+V+ + L+ + T++N
Sbjct: 742 KRESIRNKQKKEKEQYSAYPYVSEEEEVAIFENSNGNPQVYGRELGRLLFAETIKN 797
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 235 NVEEQTSGTTDSLNTRGGTLDDVATACRH 149
N++ Q + S+N+ GT++D T+ R+
Sbjct: 317 NIQTQADSASGSINSTQGTINDAMTSIRN 345
>U80453-8|AAK31442.1| 317|Caenorhabditis elegans Egg laying
defective protein 26 protein.
Length = 317
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 147 EWRQAVATSSNVPPRVFKLSVVPLVCSS 230
E+ A+ S+VPP++F+ S PL+C S
Sbjct: 210 EFVYALVEVSDVPPKIFRAS-HPLICRS 236
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 137 GGWRVATSCRDVIQCTASGIQAIRCPAGLFFDIEKQTCD 253
G + V + C I+C CP GL F + CD
Sbjct: 570 GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCD 608
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 241 FLNVEEQTSGTTDSLNTRGGTLDDVATACR 152
FLN + Q + TDSL+T +D+ T R
Sbjct: 216 FLNTDVQYTSPTDSLSTVTNVFNDLGTNAR 245
>AF025462-2|AAN72422.1| 1075|Caenorhabditis elegans Phospholipase c
like protein 1,isoform a protein.
Length = 1075
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 195 FKLSVVPLVCSSTLRNRL 248
FK++VVPL S+ +RNRL
Sbjct: 853 FKVAVVPLAESTAIRNRL 870
>AF025462-1|AAN72423.1| 1068|Caenorhabditis elegans Phospholipase c
like protein 1,isoform b protein.
Length = 1068
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 195 FKLSVVPLVCSSTLRNRL 248
FK++VVPL S+ +RNRL
Sbjct: 846 FKVAVVPLAESTAIRNRL 863
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 114 DAGEWFRLVAGEWRQAVATSSNVPPRVFKLSVVPLVCSST 233
D EW R++AGE Q + N P +F +S P+ C ST
Sbjct: 561 DRYEWMRIMAGERDQIIV---NHLPFIFDVS--PVNCPST 595
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 114 DAGEWFRLVAGEWRQAVATSSNVPPRVFKLSVVPLVCSST 233
D EW R++AGE Q + N P +F +S P+ C ST
Sbjct: 561 DRYEWMRIMAGERDQIIV---NHLPFIFDVS--PVNCPST 595
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 192 PEAVHWMTSRQLVATRQPPTGTIRQRPCPCIALVPDSRL 76
PE+ W SR + + Q P GT Q + +V + R+
Sbjct: 272 PESDQWNASRTAIYSSQDPAGTSTQNIVHWMQMVRNGRV 310
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 197 QAIRCPAGLFFDIEKQTCDW 256
Q + C G FD++ Q C W
Sbjct: 306 QRMPCAPGTVFDVQSQVCVW 325
>Z81481-2|CAB03948.1| 593|Caenorhabditis elegans Hypothetical
protein C38D9.2 protein.
Length = 593
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -1
Query: 194 YPRRYIG*RRDSLSPLASHQPEP 126
YP+ +G R ++++P +H P+P
Sbjct: 439 YPQEALGMRSENVAPQWNHYPQP 461
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 33 DGHRWRRQAEETVKKDESLEQELCK 107
+G R R+ +E +KKD+S+ + K
Sbjct: 11 EGKRLNRRIDEQIKKDQSMSLRIIK 35
>Z68760-7|CAE17825.1| 117|Caenorhabditis elegans Hypothetical
protein F36H1.12 protein.
Length = 117
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 142 LASGDKLSRRHPMYRLGY-SSYPLSRWFVL 228
+ GD LSR++P YR+ SSY ++ +L
Sbjct: 16 IKEGDHLSRQYPKYRIEVTSSYGMNEETIL 45
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 63 ETVKKDESLEQELCKDKDAGEWFRLVA 143
E VK++ S E+ KDK G+ +LVA
Sbjct: 120 EEVKEEVSAVDEIIKDKSKGKKSKLVA 146
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 63 ETVKKDESLEQELCKDKDAGEWFRLVA 143
E VK++ S E+ KDK G+ +LVA
Sbjct: 120 EEVKEEVSAVDEIIKDKSKGKKSKLVA 146
>U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical
protein W09C3.1 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 93 QELCKDKDAGEWFRLVAGEWRQAVATSSNVPPRV 194
+EL + D WF ++ + TSSN+P R+
Sbjct: 215 KELSRVDDLWSWFFMLMEMYAPLPWTSSNIPERI 248
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 266 LPLSSRKSVSQCRRTNQRDNG*LEYPRRYIG*RRDSLSPLASH 138
+PL+S +S R N NG + +G R S SP+ +
Sbjct: 52 IPLNSNAMISSSRTPNYAINGLRNRHKSLVGHRYRSTSPIGDY 94
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 266 LPLSSRKSVSQCRRTNQRDNG*LEYPRRYIG*RRDSLSPLASH 138
+PL+S +S R N NG + +G R S SP+ +
Sbjct: 52 IPLNSNAMISSSRTPNYAINGLRNRHKSLVGHRYRSTSPIGDY 94
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 266 LPLSSRKSVSQCRRTNQRDNG*LEYPRRYIG*RRDSLSPLASH 138
+PL+S +S R N NG + +G R S SP+ +
Sbjct: 52 IPLNSNAMISSSRTPNYAINGLRNRHKSLVGHRYRSTSPIGDY 94
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 21 CAVADGHRWRRQAEETVKKD 80
CA+A G W++ E+ V+ D
Sbjct: 116 CALARGQHWKKLIEKNVRSD 135
>U21310-2|AAA62521.1| 322|Caenorhabditis elegans T box family
protein 11 protein.
Length = 322
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 132 RLVAGEWRQAVATSSNVPPR 191
R G+W ++V+T PPR
Sbjct: 68 RFTGGQWAESVSTEKKDPPR 87
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 33 DGHRWRRQAEETVKKDESLEQELCK 107
+G R R+ +E +KKD+S+ + K
Sbjct: 11 EGKRLNRRIDEQIKKDQSMSLRIIK 35
>AJ010708-1|CAA09308.1| 1158|Caenorhabditis elegans calcium ATPase
protein.
Length = 1158
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 86 SGTRAMQGQGRWRMVPVG 139
SGT AM+G GR+ + VG
Sbjct: 234 SGTHAMEGSGRFLVTAVG 251
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 21 CAVADGHRWRRQAEETVKKD 80
CA+A G W++ E+ V+ D
Sbjct: 116 CALARGQHWKKLIEKNVRSD 135
>AF125446-4|AAD12806.2| 1158|Caenorhabditis elegans Hypothetical
protein R05C11.3 protein.
Length = 1158
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 86 SGTRAMQGQGRWRMVPVG 139
SGT AM+G GR+ + VG
Sbjct: 234 SGTHAMEGSGRFLVTAVG 251
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 25.0 bits (52), Expect = 7.4
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -3
Query: 168 SRQLVATRQPPTGTIRQRPCPCIALVPDSRLSSLFPQLVAAIGAHQQQRRRT 13
+R VATR TG RQR A V ++ V A G HQ RT
Sbjct: 664 TRGTVATRSVATGAQRQRNAQPAARVQ----PRIYESTVTATGHHQAHAIRT 711
>AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical
protein M04F3.3 protein.
Length = 439
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 93 QELCKDKDAGEWFRLVAGEWRQAVATSSNVPPRV 194
+EL + D WF ++ + TSSN+P R+
Sbjct: 215 KELSRVDDLWSWFFMLMEMYAPLPWTSSNIPERI 248
>Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical
protein K01D12.10 protein.
Length = 194
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 27 VADGHRWRRQAEETVKKDESLEQELCKDKDAGE 125
V +G + ++ EE KK+E E+E+ K ++ E
Sbjct: 86 VLEGKQEEKEEEEVEKKEEKEEEEVGKKEEKVE 118
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1
Query: 73 RKTRVWNKSYARTRTLANGSG 135
RKT V N+SY RT TLA SG
Sbjct: 223 RKTTVLNESYGRT-TLALKSG 242
>AL132943-11|CAB61047.2| 97|Caenorhabditis elegans Hypothetical
protein Y116F11B.1 protein.
Length = 97
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 131 PVGGWRVATSCRDVIQCTASGIQAIRCP 214
P G +AT C QCTA IQ CP
Sbjct: 67 PQEGIDIATQCC-TYQCTAEYIQTACCP 93
>AL023844-10|CAA19530.3| 503|Caenorhabditis elegans Hypothetical
protein Y48A6B.6a protein.
Length = 503
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 148 SGDKLSRRHPMYRLGYSSYPLSRWFVLRH 234
+G++ + PM LGY Y WF + +
Sbjct: 266 TGEEFTEMEPMPILGYIEYVCIVWFTMEY 294
>AL023844-9|CAH04760.1| 512|Caenorhabditis elegans Hypothetical
protein Y48A6B.6b protein.
Length = 512
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 148 SGDKLSRRHPMYRLGYSSYPLSRWFVLRH 234
+G++ + PM LGY Y WF + +
Sbjct: 302 TGEEFTEMEPMPILGYIEYVCIVWFTMEY 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,551,439
Number of Sequences: 27780
Number of extensions: 123382
Number of successful extensions: 507
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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