Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_L24
         (266 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   0.65 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   2.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   3.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   6.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   6.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   6.1  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 0.65
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 222 KPAGQRIA*IPEAVHWMTSRQLVATRQPP 136
           K + QRI    E   W  +R +  TRQPP
Sbjct: 133 KKSVQRIKPYDEYYVWRDARIVNGTRQPP 161


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 138 PTGTIRQRPCPCIALVPDSRLSSLFPQLVAAIGAHQQQRRR 16
           PTG+  Q      +  P +R +S     V+A  AH   +++
Sbjct: 64  PTGSSPQHSGSSASTSPAARTTSSMYPYVSAAAAHHHHQQQ 104


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 82  RVWNKSYARTRTLANGSGWWLASGDKL 162
           +VWN  YAR +  +   GW     D++
Sbjct: 69  KVWNGQYARVQQ-SMPDGWETEISDQM 94


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 124 NGSGWWLASGDKLSRRHPMYR 186
           NG+GW    G K    H  Y+
Sbjct: 176 NGTGWTFHEGRKQFYFHQFYK 196


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 154 DKLSRRHPMYRLGYSSYP 207
           D ++ RHPM+ L +   P
Sbjct: 424 DAMASRHPMHYLPFGDGP 441


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 209 CPAGLFFDIEKQTC 250
           C  G   D+EKQ C
Sbjct: 249 CKPGYQADVEKQEC 262


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +2

Query: 98  AMQGQGRWRMVPVG 139
           ++QG G++ ++P G
Sbjct: 178 SLQGDGKFHLLPTG 191


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +2

Query: 98  AMQGQGRWRMVPVG 139
           ++QG G++ ++P G
Sbjct: 178 SLQGDGKFHLLPTG 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,146
Number of Sequences: 438
Number of extensions: 1368
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)