Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L22
(438 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 159 2e-39
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 159 2e-39
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 159 2e-39
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 159 2e-39
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 141 3e-34
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 77 1e-14
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 32 0.39
BT016127-1|AAV37012.1| 367|Drosophila melanogaster GH23568p pro... 27 8.4
AE014298-2933|AAF49016.2| 367|Drosophila melanogaster CG32528-P... 27 8.4
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 159 bits (386), Expect = 2e-39
Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPD 186
GY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL D
Sbjct: 135 GYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALD 194
Query: 187 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS---- 354
SIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 195 SIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVI 254
Query: 355 ERPEGYEPPVQES 393
+RPEGYEPPVQE+
Sbjct: 255 DRPEGYEPPVQEA 267
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 159 bits (386), Expect = 2e-39
Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPD 186
GY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL D
Sbjct: 30 GYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALD 89
Query: 187 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS---- 354
SIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 90 SIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVI 149
Query: 355 ERPEGYEPPVQES 393
+RPEGYEPPVQE+
Sbjct: 150 DRPEGYEPPVQEA 162
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 159 bits (386), Expect = 2e-39
Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPD 186
GY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL D
Sbjct: 85 GYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALD 144
Query: 187 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS---- 354
SIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 145 SIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVI 204
Query: 355 ERPEGYEPPVQES 393
+RPEGYEPPVQE+
Sbjct: 205 DRPEGYEPPVQEA 217
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 159 bits (386), Expect = 2e-39
Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVVNKLIPD 186
GY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL D
Sbjct: 135 GYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALD 194
Query: 187 SIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKS---- 354
SIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+
Sbjct: 195 SIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVI 254
Query: 355 ERPEGYEPPVQES 393
+RPEGYEPPVQE+
Sbjct: 255 DRPEGYEPPVQEA 267
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 141 bits (342), Expect = 3e-34
Identities = 73/134 (54%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTSSELREVVNKLIP 183
GY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL
Sbjct: 136 GYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLAL 195
Query: 184 DSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMXXXXXXXXXXXXXXXDKSERP 363
DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ P
Sbjct: 196 DSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAP 255
Query: 364 EG----YEPPVQES 393
+ +PPVQES
Sbjct: 256 KSTALKVKPPVQES 269
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +1
Query: 7 GYVLRVFCIGFTNKDTLSQRKTCYAQHTQVRAIRKKMCEIITRDVTSSELREVV 168
GY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 135 GYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 249 NADITKWVDTVTRLFDILSDGVRNQLVHDFTKL*TGHIARDDFTHFFPDC 100
+A++T +T L D++S GV L+H FT++ T + + DC
Sbjct: 265 SANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
>BT016127-1|AAV37012.1| 367|Drosophila melanogaster GH23568p
protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 294 LGDFKTRPLQYFHLPNADITKWVDTVTRLFDILSD 190
LG F PL FHL D+ + V V FD++ D
Sbjct: 298 LGGFFV-PLHEFHLTPQDVDQMVSNVAFAFDLMQD 331
>AE014298-2933|AAF49016.2| 367|Drosophila melanogaster CG32528-PA
protein.
Length = 367
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 294 LGDFKTRPLQYFHLPNADITKWVDTVTRLFDILSD 190
LG F PL FHL D+ + V V FD++ D
Sbjct: 298 LGGFFV-PLHEFHLTPQDVDQMVSNVAFAFDLMQD 331
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,869,126
Number of Sequences: 53049
Number of extensions: 328620
Number of successful extensions: 950
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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