Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L21
(196 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 1.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 7.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 7.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 19 7.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 7.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 19 7.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 19 7.1
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 19 7.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 18 9.4
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 18 9.4
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 18 9.4
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 18 9.4
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 18 9.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 18 9.4
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 152 VEGGRF*WATDQHIPY 105
V+ G F W+ D+ +PY
Sbjct: 173 VQQGAFGWSWDEVMPY 188
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 70 INFAMRIYKYSLCN 29
++FA+RIY+ N
Sbjct: 162 VHFALRIYRNGTVN 175
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 70 INFAMRIYKYSLCN 29
++FA+RIY+ N
Sbjct: 162 VHFALRIYRNGTVN 175
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 70 INFAMRIYKYSLCN 29
++FA+RIY+ N
Sbjct: 213 VHFALRIYRNGTVN 226
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 70 INFAMRIYKYSLCN 29
++FA+RIY+ N
Sbjct: 162 VHFALRIYRNGTVN 175
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 18.6 bits (36), Expect = 7.1
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 85 SWPLL*AYGIC*SVAHQNLPPSTLTN 162
SW L A + + PP +LT+
Sbjct: 327 SWALFKAMSHMLCIGYGRFPPQSLTD 352
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 18.6 bits (36), Expect = 7.1
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +1
Query: 85 SWPLL*AYGIC*SVAHQNLPPSTLTN 162
SW L A + + PP +LT+
Sbjct: 295 SWALFKAMSHMLCIGYGRFPPQSLTD 320
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 18.6 bits (36), Expect = 7.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 23 TLVA*TIFIYSHGEIN 70
T+V F YSHG N
Sbjct: 17 TIVMCQTFTYSHGWTN 32
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 94 MATTANPSINFAM 56
+AT +PS NF M
Sbjct: 347 LATREHPSRNFTM 359
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 115 IYHTLIA 95
IYHTL+A
Sbjct: 177 IYHTLVA 183
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 115 IYHTLIA 95
IYHTL+A
Sbjct: 192 IYHTLVA 198
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 51 ILMAKLILGLAVVAIAISVWYMLIC 125
+ +A + G +AIAI +IC
Sbjct: 190 VKLAGTVFGSVAIAIAIVELIGIIC 214
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 115 IYHTLIA 95
IYHTL+A
Sbjct: 80 IYHTLVA 86
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 24 RLLHKLYLYILMAKLILGLA 83
RLL L ++++ LI G+A
Sbjct: 105 RLLKMFILPLIVSSLISGMA 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,218
Number of Sequences: 438
Number of extensions: 891
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2541420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -