BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L19
(397 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC041168-1|AAH41168.1| 355|Homo sapiens LCN12 protein protein. 31 1.0
BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa prot... 31 1.4
AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa prot... 31 1.4
AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa prot... 31 1.4
AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa prot... 31 1.4
AK022572-1|BAB14106.1| 588|Homo sapiens protein ( Homo sapiens ... 31 1.4
AK001754-1|BAA91885.1| 775|Homo sapiens protein ( Homo sapiens ... 31 1.4
AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens ... 31 1.4
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 30 3.2
BC010123-1|AAH10123.2| 455|Homo sapiens SH3-domain binding prot... 30 3.2
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 30 3.2
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 30 3.2
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 30 3.2
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 30 3.2
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 30 3.2
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 30 3.2
AB005047-1|BAA25922.1| 425|Homo sapiens SH3 binding protein pro... 30 3.2
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 29 4.2
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 29 4.2
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 29 4.2
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 29 4.2
AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens ... 29 4.2
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 29 4.2
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 29 4.2
U88317-1|AAB49305.1| 662|Homo sapiens 15-lipoxygenase protein. 29 5.6
M23892-1|AAA36182.1| 662|Homo sapiens protein ( Human 15-lipoxy... 29 5.6
BC029032-1|AAH29032.1| 662|Homo sapiens arachidonate 15-lipoxyg... 29 5.6
AY505111-1|AAR84235.1| 662|Homo sapiens arachidonate 15-lipoxyg... 29 5.6
BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for IM... 29 7.4
X63751-1|CAC69885.1| 411|Homo sapiens putative DNA binding prot... 28 9.7
BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein. 28 9.7
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 28 9.7
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 28 9.7
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 28 9.7
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 28 9.7
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 28 9.7
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 28 9.7
>BC041168-1|AAH41168.1| 355|Homo sapiens LCN12 protein protein.
Length = 355
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 83 PSGPLP-HQVRVRVPRLGAPPPARVAPSPL 169
P P+P H + +VP G PPPA AP PL
Sbjct: 257 PGSPVPGHLLPPQVPCPGPPPPAPPAPGPL 286
>BC020107-1|AAH20107.1| 1156|Homo sapiens nucleoporin 133kDa protein.
Length = 1156
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 1119 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 1149
>AL160004-2|CAI19048.1| 1156|Homo sapiens nucleoporin 133kDa protein.
Length = 1156
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 1119 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 1149
>AL139252-2|CAI22354.1| 1156|Homo sapiens nucleoporin 133kDa protein.
Length = 1156
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 1119 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 1149
>AL121990-3|CAI22011.1| 1156|Homo sapiens nucleoporin 133kDa protein.
Length = 1156
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 1119 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 1149
>AK022572-1|BAB14106.1| 588|Homo sapiens protein ( Homo sapiens
cDNA FLJ12510 fis, clone NT2RM2001723. ).
Length = 588
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 551 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 581
>AK001754-1|BAA91885.1| 775|Homo sapiens protein ( Homo sapiens
cDNA FLJ10892 fis, clone NT2RP4002298. ).
Length = 775
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 738 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 768
>AK001676-1|BAA91829.1| 1156|Homo sapiens protein ( Homo sapiens cDNA
FLJ10814 fis, clone NT2RP4000984. ).
Length = 1156
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 27 LPPLEDILTAPELAELVSDPRVHFLIKYGYE 119
LP ++D+L A +L L S+P F++K YE
Sbjct: 1119 LPEVKDLLQADQLGSLKSNPYFEFVLKANYE 1149
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>BC010123-1|AAH10123.2| 455|Homo sapiens SH3-domain binding protein
5 (BTK-associated) protein.
Length = 455
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 104 DEEVDPRVGDQLGELRRRQDVLERRQQQL 18
+EEVDPR+ +L +L + D + RR+ +L
Sbjct: 38 EEEVDPRIQGELEKLNQSTDDINRRETEL 66
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens
cDNA FLJ38696 fis, clone KIDNE2001931, highly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN G. ).
Length = 378
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 132 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 160
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G PPP R APS V S
Sbjct: 145 GPLPVK-RGPPPRSGGPPPKRSAPSGPVRS 173
>AB005047-1|BAA25922.1| 425|Homo sapiens SH3 binding protein
protein.
Length = 425
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 104 DEEVDPRVGDQLGELRRRQDVLERRQQQL 18
+EEVDPR+ +L +L + D + RR+ +L
Sbjct: 8 EEEVDPRIQGELEKLNQSTDDINRRETEL 36
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G P P R APS LV S
Sbjct: 145 GPLPVK-RGPPPRSGGPSPKRSAPSGLVRS 173
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRV-PRLGAPPPARVAPSPLVYSIRSL 190
L+P GPL Q+ +++ P GAPPP A SPL ++SL
Sbjct: 762 LQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSL 801
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G P P R APS LV S
Sbjct: 145 GPLPVK-RGPPPRSGGPSPKRSAPSGLVRS 173
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +2
Query: 89 GPLPHQVRVRVPRLGAPPPARVAPSPLVYS 178
GPLP + R PR G P P R APS LV S
Sbjct: 145 GPLPVK-RGPPPRSGGPSPKRSAPSGLVRS 173
>AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ35759 fis, clone TESTI2004737. ).
Length = 710
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRV-PRLGAPPPARVAPSPLVYSIRSL 190
L+P GPL Q+ +++ P GAPPP A SPL ++SL
Sbjct: 468 LQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSL 507
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRV-PRLGAPPPARVAPSPLVYSIRSL 190
L+P GPL Q+ +++ P GAPPP A SPL ++SL
Sbjct: 762 LQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSL 801
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 29.5 bits (63), Expect = 4.2
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRV-PRLGAPPPARVAPSPLVYSIRSL 190
L+P GPL Q+ +++ P GAPPP A SPL ++SL
Sbjct: 726 LQPPGPLLSGQLGLQLLPGGGAPPPLSEASSPLACLLQSL 765
>U88317-1|AAB49305.1| 662|Homo sapiens 15-lipoxygenase protein.
Length = 662
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRVPRLGAPPPARVAPS 163
L+P G L P +++++PR G+PPP P+
Sbjct: 305 LQPDGKLLPMVIQLQLPRTGSPPPPLFLPT 334
>M23892-1|AAA36182.1| 662|Homo sapiens protein ( Human
15-lipoxygenase mRNA, complete cds. ).
Length = 662
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRVPRLGAPPPARVAPS 163
L+P G L P +++++PR G+PPP P+
Sbjct: 305 LQPDGKLLPMVIQLQLPRTGSPPPPLFLPT 334
>BC029032-1|AAH29032.1| 662|Homo sapiens arachidonate
15-lipoxygenase protein.
Length = 662
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRVPRLGAPPPARVAPS 163
L+P G L P +++++PR G+PPP P+
Sbjct: 305 LQPDGKLLPMVIQLQLPRTGSPPPPLFLPT 334
>AY505111-1|AAR84235.1| 662|Homo sapiens arachidonate
15-lipoxygenase protein.
Length = 662
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 77 LRPSGPL-PHQVRVRVPRLGAPPPARVAPS 163
L+P G L P +++++PR G+PPP P+
Sbjct: 305 LQPDGKLLPMVIQLQLPRTGSPPPPLFLPT 334
>BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for
IMAGE:4873970) protein.
Length = 112
Score = 28.7 bits (61), Expect = 7.4
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 77 LRPSGPLPHQVRVRVPRLGAPPPARVAPSPLV-YSIR 184
L PS PH R +LG PPP R PS LV Y +R
Sbjct: 46 LAPSSARPHFPGPRGTQLGLPPPER--PSTLVLYRVR 80
>X63751-1|CAC69885.1| 411|Homo sapiens putative DNA binding protein
protein.
Length = 411
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 299 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 332
>BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein.
Length = 1365
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 424 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 457
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 927 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 960
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 967 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 1000
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 967 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 1000
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 967 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 1000
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 967 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 1000
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 92 PLPHQVRVRVPRLGAPPPARVAPSPLVYSIRSLLM 196
P P+++ R R+ AP P R+AP PL+ + R +M
Sbjct: 973 PRPYRIAPRSYRI-APRPYRLAPRPLMLASRRSMM 1006
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,194,183
Number of Sequences: 237096
Number of extensions: 788506
Number of successful extensions: 3286
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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