Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L17
(227 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 99 4e-22
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 97 1e-21
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 97 1e-21
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 76 4e-15
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 52 5e-08
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 52 5e-08
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 52 5e-08
03_01_0034 + 318432-318825,318902-319851 52 5e-08
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 52 5e-08
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 52 5e-08
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 48 8e-07
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 45 8e-06
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 44 1e-05
03_05_0204 - 21961332-21961715,21962030-21962374 27 1.6
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 27 2.1
03_01_0650 - 4762354-4763247 26 3.7
02_05_0490 + 29456825-29457499,29458771-29459057,29460922-294610... 26 3.7
11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15... 26 4.9
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 26 4.9
01_06_1010 + 33802947-33803473,33804096-33804273 26 4.9
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 25 6.5
07_03_0077 - 13128304-13128943,13129269-13129300 25 8.6
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 25 8.6
01_07_0182 + 41838805-41839152,41839230-41839610 25 8.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 99.1 bits (236), Expect = 4e-22
Identities = 46/73 (63%), Positives = 54/73 (73%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+F+ LL+ERLSVDYGKKSKL F IYP+ QVSTAVVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NS+L++ S LEH+
Sbjct: 186 NSVLSTHSLLEHT 198
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 97.5 bits (232), Expect = 1e-21
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+F+ LL+ERLSVDYGKKSKL F +YP+ QVST+VVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NS+L++ S LEH+
Sbjct: 186 NSVLSTHSLLEHT 198
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 97.5 bits (232), Expect = 1e-21
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+F+ LL+ERLSVDYGKKSKL F +YP+ QVST+VVEPY
Sbjct: 126 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NS+L++ S LEH+
Sbjct: 186 NSVLSTHSLLEHT 198
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 76.2 bits (179), Expect = 4e-15
Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 21/94 (22%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQ--------- 160
AD CTGL GFL+F+ LL+ERLSVDYG+KSKL F IYP+ Q
Sbjct: 186 ADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSCM 245
Query: 161 ------------VSTAVVEPYNSILTSQSSLEHS 226
+STAVVEPYNS+L++ S +EH+
Sbjct: 246 HIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHT 279
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENA 196
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 303 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 362
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 363 YNATLSVHQLVENA 376
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENA 196
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENA 196
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENA 196
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 52.4 bits (120), Expect = 5e-08
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + L F+++P+ +VS VVEP
Sbjct: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENA 196
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 48.4 bits (110), Expect = 8e-07
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 26 LHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPYNSILTS 205
+HGF + H LL+ ++ +Y + L F+++P+ +VS VVEPYN+ L+
Sbjct: 151 MHGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 210
Query: 206 QSSLEHS 226
+E++
Sbjct: 211 HQLVENA 217
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 45.2 bits (102), Expect = 8e-06
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-AAQVSTAVVE 181
EAD L GF++ H L+E L+ Y KK ++++P + S VV+
Sbjct: 125 EADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQ 184
Query: 182 PYNSILT 202
PYNS+LT
Sbjct: 185 PYNSLLT 191
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 44.4 bits (100), Expect = 1e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +2
Query: 32 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPYNSILTSQS 211
GF + H LL+ ++ +Y + L F+++P+ +VS VVEPYN+ L+
Sbjct: 148 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 207
Query: 212 SLEHS 226
+E++
Sbjct: 208 LVENA 212
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 25 PPWIPHLPLVRWWHRFWFHFSPHGA 99
PP +P P R RFW HF H A
Sbjct: 81 PPLLPADPYHRAMARFWAHFIDHKA 105
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 25 PPWIPHLPLVRWWHRFWFHF 84
PP +P PL R RFW HF
Sbjct: 85 PPLLPADPLRRAMARFWVHF 104
>03_01_0650 - 4762354-4763247
Length = 297
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 181 LYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSETRTGATT 56
L HLG + + + +L A+ +G L + + +T++ ATT
Sbjct: 170 LRRGGAHLGPPLHAAVDAKLHAICHGMDLPQPQPQTQSNATT 211
>02_05_0490 + 29456825-29457499,29458771-29459057,29460922-29461039,
29461451-29461972,29462058-29462170,29463033-29463053,
29463726-29463960,29464218-29464381,29464695-29464776,
29465077-29465166,29465625-29465858,29466347-29466418,
29466857-29467000,29467573-29467659,29467940-29468098,
29469216-29469476,29469789-29469836
Length = 1103
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = -2
Query: 184 GLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESMEACA 17
G +NS H+ D LQF +LAV+ S+ ++ T +T +D S E A
Sbjct: 914 GRFNSK-HITAENDPSLQFAILAVITIASISLQKMMLYTPSTKSSDDDTISDENSA 968
>11_01_0022 +
151233-151515,152632-152852,153579-153656,154558-154674,
155970-156316,156504-157032
Length = 524
Score = 25.8 bits (54), Expect = 4.9
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 VRWWHRFWFHFSPHGATLR*LRQEV*IGVRYLSRS-PGVHCCCRALQLYPYKPKQ 213
V W HRF +S H T +RY P CCC ALQ++ + K+
Sbjct: 79 VSWEHRFSPRYSFHDTTTV-------SPMRYTEGPIPRYACCCDALQIFSLQVKE 126
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 25.8 bits (54), Expect = 4.9
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -2
Query: 199 KDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESME 26
K R + L + HLGCG + A GE E R+ TTE + +EE ME
Sbjct: 7 KARALPLDGTVEHLGCGQGVVIG----AARQGEDQVGFLQELRSMPTTESMTEEERME 60
>01_06_1010 + 33802947-33803473,33804096-33804273
Length = 234
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 130 IGVRYLSRSPGVHCCCRALQLYPYK 204
+G+ Y S G+H R LQLYP K
Sbjct: 183 LGLLYSSSHEGLHYLQRYLQLYPPK 207
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 31 WIPHLPLVRWWHRFWFHFSPHGATLR*LRQ 120
W LPL W FWF+ HGA LR+
Sbjct: 503 WSVILPL-SWVKPFWFYLVSHGAHAIGLRE 531
>07_03_0077 - 13128304-13128943,13129269-13129300
Length = 223
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 55 RWWHRFWFHFSPHGA 99
RW+ RF HF P GA
Sbjct: 185 RWYPRFASHFDPSGA 199
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 151 GIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEE 35
G+DSE F L+ E ++R E T A + + +EE
Sbjct: 559 GLDSEPPFENLSAGTPEEDSDDRDEADTTAESAELPEEE 597
>01_07_0182 + 41838805-41839152,41839230-41839610
Length = 242
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 25 PPWIPHLPLVRWWHRFWFHFSPHGATL 105
PP +P P R RFW F H A L
Sbjct: 81 PPILPADPYDRATARFWAQFIDHKANL 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,205,697
Number of Sequences: 37544
Number of extensions: 93522
Number of successful extensions: 306
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 14,793,348
effective HSP length: 54
effective length of database: 12,765,972
effective search space used: 268085412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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