Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L17
(227 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 44 5e-07
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 44 5e-07
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 44 5e-07
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 44 5e-07
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 27 0.11
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 22 2.3
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 22 3.1
AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding pr... 21 4.0
AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding pr... 21 5.3
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 20 9.3
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 20 9.3
AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione S-tran... 20 9.3
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.4 bits (100), Expect = 5e-07
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
E + C L GF + H LL+ ++ +Y + +++ P+ +VS VVEP
Sbjct: 19 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 78
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 79 YNATLSIHQLVENT 92
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.4 bits (100), Expect = 5e-07
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
E + C L GF + H LL+ ++ +Y + +++ P+ +VS VVEP
Sbjct: 19 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 78
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 79 YNATLSIHQLVENT 92
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.4 bits (100), Expect = 5e-07
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
E + C L GF + H LL+ ++ +Y + +++ P+ +VS VVEP
Sbjct: 19 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 78
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 79 YNATLSIHQLVENT 92
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 44.4 bits (100), Expect = 5e-07
Identities = 20/74 (27%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
E + C L GF + H LL+ ++ +Y + +++ P+ +VS VVEP
Sbjct: 19 ECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEP 78
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 79 YNATLSIHQLVENT 92
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.11
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +1
Query: 7 G*PMHRPPWIPHLPL--VRWWHRFWFH 81
G P RPPW P P WW R FH
Sbjct: 88 GIPPFRPPWHPRPPFGGRPWWLRPPFH 114
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 22.2 bits (45), Expect = 2.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 223 VFQAALACKDRVVGL 179
+FQA L+ K+RVV L
Sbjct: 563 IFQAVLSVKERVVDL 577
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 21.8 bits (44), Expect = 3.1
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 160 GVHCCCR 180
G HCCCR
Sbjct: 285 GQHCCCR 291
>AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP5 protein.
Length = 156
Score = 21.4 bits (43), Expect = 4.0
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = +1
Query: 58 WWHRFWFHF 84
WW R+W+ F
Sbjct: 8 WWWRWWWDF 16
>AY330179-1|AAQ16285.1| 171|Anopheles gambiae odorant-binding
protein AgamOBP53 protein.
Length = 171
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 142 SELQFRLLAVVNGESLHEER 83
++ Q L V++GE LH E+
Sbjct: 69 AQCQLEELEVIDGEELHLEK 88
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 20.2 bits (40), Expect = 9.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 202 CKDRVVGLYNSSGHLGCGIDSELQF 128
CKD + Y S G ID+ LQ+
Sbjct: 1820 CKDAIDAQYERSLSSGFFIDNCLQY 1844
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 45 KMRNPWRPVHWSASC 1
+ N P WSASC
Sbjct: 42 EQENGTAPADWSASC 56
>AF515521-1|AAM61888.1| 233|Anopheles gambiae glutathione
S-transferase u1 protein.
Length = 233
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 95 ERLSVDYGKKSKL 133
E +SVDYGK L
Sbjct: 27 EHVSVDYGKAEHL 39
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,478
Number of Sequences: 2352
Number of extensions: 3513
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 10158525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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