Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L17
(227 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 109 2e-25
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 109 2e-25
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 109 2e-25
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 109 2e-25
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 107 8e-25
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 107 8e-25
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 107 8e-25
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 107 8e-25
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 107 8e-25
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 105 3e-24
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 102 3e-23
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 100 3e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 97 1e-21
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 97 1e-21
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 97 1e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 97 1e-21
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 49 5e-07
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 49 5e-07
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 49 5e-07
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 47 2e-06
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 47 2e-06
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 46 5e-06
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 43 3e-05
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 43 3e-05
Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical pr... 27 2.4
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 26 4.1
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 26 4.1
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 26 4.1
Z93393-5|CAB07690.1| 611|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 25 9.6
AY455927-3|AAR26304.1| 347|Caenorhabditis elegans phosphoglucos... 25 9.6
AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical ... 25 9.6
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 109 bits (263), Expect = 2e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+FH LLMERLSVDYGKK+KLEF+IYPA QVSTAVVEPY
Sbjct: 126 ADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 186 NSILTTHTTLEHS 198
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 109 bits (263), Expect = 2e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+FH LLMERLSVDYGKK+KLEF+IYPA QVSTAVVEPY
Sbjct: 125 ADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 184
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 185 NSILTTHTTLEHS 197
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 109 bits (263), Expect = 2e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+FH LLMERLSVDYGKK+KLEF+IYPA QVSTAVVEPY
Sbjct: 126 ADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 186 NSILTTHTTLEHS 198
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 109 bits (263), Expect = 2e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD CTGL GFL+FH LLMERLSVDYGKK+KLEF+IYPA QVSTAVVEPY
Sbjct: 126 ADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPY 185
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 186 NSILTTHTTLEHS 198
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 107 bits (258), Expect = 8e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QVSTAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 107 bits (258), Expect = 8e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QVSTAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 107 bits (258), Expect = 8e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QVSTAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 107 bits (258), Expect = 8e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QVSTAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 107 bits (258), Expect = 8e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QVSTAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 105 bits (253), Expect = 3e-24
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
AD C+GL GF +FH LLMERLSVDYGKKSKLEF+IYPA QV TAVVEPY
Sbjct: 124 ADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAVVEPY 183
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 184 NSILTTHTTLEHS 196
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 102 bits (245), Expect = 3e-23
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +2
Query: 11 DQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPYN 190
+ C GL GFL+FH LLMERLSVDYGKKSKLEF IYPA QVST++VEPYN
Sbjct: 132 ENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTSMVEPYN 191
Query: 191 SILTSQSSLEHS 226
SILT+ ++LEHS
Sbjct: 192 SILTTHTTLEHS 203
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 99.5 bits (237), Expect = 3e-22
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
A+ C GL GF +FH +LMERLS +YGKKSKLEF+IYPA Q+ST+VVEPY
Sbjct: 123 ANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSVVEPY 182
Query: 188 NSILTSQSSLEHS 226
NSILT+ ++LEHS
Sbjct: 183 NSILTTHTTLEHS 195
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 97.5 bits (232), Expect = 1e-21
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
A+ C GL GF+IFH LLMERLS +YGKK KLEFAIYPA QVST++VEPY
Sbjct: 132 AENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 191
Query: 188 NSILTSQSSLEHS 226
NSIL + ++LEHS
Sbjct: 192 NSILMTHTTLEHS 204
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 97.5 bits (232), Expect = 1e-21
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = +2
Query: 11 DQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPYN 190
++C L GFLIFH L+MERLS+DYGKK+KLEF+IYPA Q+ST++VEPYN
Sbjct: 127 ERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTSMVEPYN 186
Query: 191 SILTSQSSLEHS 226
S+LT+ ++LEHS
Sbjct: 187 SLLTTHTTLEHS 198
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 97.5 bits (232), Expect = 1e-21
Identities = 45/73 (61%), Positives = 53/73 (72%)
Frame = +2
Query: 8 ADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEPY 187
A+ C GL GF+IFH LLMERLS +YGKK KLEFAIYPA QVST++VEPY
Sbjct: 104 AENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPY 163
Query: 188 NSILTSQSSLEHS 226
NSIL + ++LEHS
Sbjct: 164 NSILMTHTTLEHS 176
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 97.1 bits (231), Expect = 1e-21
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
+ + C GL GFL+FH LLMERLSV++GKKSKLEF++YPA QVST+VVEP
Sbjct: 128 QTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSVVEP 187
Query: 185 YNSILTSQSSLEHS 226
YNSILT+ ++LE S
Sbjct: 188 YNSILTTHTTLELS 201
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 5e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ L GF + H LL+ +L +Y K+ +I P+A+VS VVEP
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 185 YNSILT 202
YN+IL+
Sbjct: 183 YNAILS 188
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 5e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ L GF + H LL+ +L +Y K+ +I P+A+VS VVEP
Sbjct: 123 EAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEP 182
Query: 185 YNSILT 202
YN+IL+
Sbjct: 183 YNAILS 188
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 48.8 bits (111), Expect = 5e-07
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + + F++ P+ +VS VVEP
Sbjct: 123 EAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + F++ P+ +VS VVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ +Y + F++ P+ +VS VVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 45.6 bits (103), Expect = 5e-06
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ C L GF + H LL+ ++ ++ + F++ P+ +VS VVEP
Sbjct: 123 EAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ L GF + H LL+ ++ +Y + F++ P+ +VS VVEP
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 43.2 bits (97), Expect = 3e-05
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 5 EADQCTGLHGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAAQVSTAVVEP 184
EA+ L GF + H LL+ ++ +Y + F++ P+ +VS VVEP
Sbjct: 123 EAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEP 182
Query: 185 YNSILTSQSSLEHS 226
YN+ L+ +E++
Sbjct: 183 YNATLSVHQLVENT 196
>Z36948-1|CAA85409.1| 180|Caenorhabditis elegans Hypothetical
protein D2089.2 protein.
Length = 180
Score = 26.6 bits (56), Expect = 2.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 58 WWHRFWFHFSPHGA 99
WW FWF+F +GA
Sbjct: 146 WWMTFWFNFLYYGA 159
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 199 KDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSET 74
+D++ L ++S H G G +S + + V L SET
Sbjct: 268 RDQITALLDTSNHFGSGNNSANKGKRAPSVTSSGLRSSESET 309
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 115 VVNGESLHEERSETRTGATTERVEDEE 35
+V+ E E+RS +GA ER D+E
Sbjct: 884 IVSSEQHEEDRSSATSGADYERSSDQE 910
Score = 25.8 bits (54), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 115 VVNGESLHEERSETRTGATTERVEDEE 35
+V+ E E+RS +GA ER D+E
Sbjct: 1542 IVSSEQHEEDRSSATSGADYERSSDQE 1568
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2
Query: 199 KDRVVGLYNSSGHLGCGIDSELQFRLLAVVNGESLHEERSET 74
+D++ L ++S H G G +S + + V L SET
Sbjct: 268 RDQITALLDTSNHFGSGNNSANKGKRAPSVTSSGLRSSESET 309
>Z93393-5|CAB07690.1| 611|Caenorhabditis elegans Hypothetical
protein Y48E1B.4 protein.
Length = 611
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 54 NEWKMRNPWRPVHWSASC 1
+ WK R PWRPV+ C
Sbjct: 538 DSWK-REPWRPVYSDGMC 554
>Z81130-8|CAB03416.1| 347|Caenorhabditis elegans Hypothetical
protein T23G11.2 protein.
Length = 347
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 226 GVFQAALACKDRVVGLYNSSGH 161
GV++ +L CK ++ YN G+
Sbjct: 130 GVYKLSLECKTELIPFYNKFGY 151
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 226 GVFQAALACKDRVVGLYNSSGH 161
GV++ +L CK ++ YN G+
Sbjct: 306 GVYKLSLECKTELIPFYNKFGY 327
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = -2
Query: 151 GIDSELQFRLLAVVNGESLHEERSETRTGATTERVEDEESMEACALVSL 5
G+D E QF + N S+H++ T +MEA L +
Sbjct: 639 GLDKETQFEMCTEYNSPSIHDKEILTNANVGEVLPVPVNAMEAHNLTGM 687
>AY455927-3|AAR26304.1| 347|Caenorhabditis elegans
phosphoglucosamine acetyltransferaseprotein.
Length = 347
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 226 GVFQAALACKDRVVGLYNSSGH 161
GV++ +L CK ++ YN G+
Sbjct: 130 GVYKLSLECKTELIPFYNKFGY 151
Score = 24.6 bits (51), Expect = 9.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 226 GVFQAALACKDRVVGLYNSSGH 161
GV++ +L CK ++ YN G+
Sbjct: 306 GVYKLSLECKTELIPFYNKFGY 327
>AF024503-8|AAG24090.2| 283|Caenorhabditis elegans Hypothetical
protein F31F4.11 protein.
Length = 283
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 113 YGKKSKLEFAIYPAAQVSTAVVEPYNSILTSQSS 214
+G K ++ A+VST E NSI+ SQ+S
Sbjct: 165 FGDDFKFMRNLFSEAKVSTDAHESVNSIIISQNS 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,918,145
Number of Sequences: 27780
Number of extensions: 71202
Number of successful extensions: 210
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 12,740,198
effective HSP length: 55
effective length of database: 11,212,298
effective search space used: 224245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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