Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_L16
         (444 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   6.4  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 286  LSKQYSHKPICLNGENISVYDSIQYGPANESSRNSP 179
            L  + S + +  NGE ++ YD + YG    S  + P
Sbjct: 2587 LDHERSVRLVIKNGEIVAAYDYLPYGELLRSYGDDP 2622


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 286  LSKQYSHKPICLNGENISVYDSIQYGPANESSRNSP 179
            L  + S + +  NGE ++ YD + YG    S  + P
Sbjct: 2588 LDHERSVRLVIKNGEIVAAYDYLPYGELLRSYGDDP 2623


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 220 IQYGPANESSRNSPATYVMLAPTRV 146
           + YG   +   N P  +V LA T+V
Sbjct: 138 VAYGEGTDDDYNRPHLFVSLATTQV 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,046
Number of Sequences: 2352
Number of extensions: 10421
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)