Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L16
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066965-1|AAH66965.1| 359|Homo sapiens C14orf148 protein protein. 31 1.8
AF111168-1|AAD09625.1| 250|Homo sapiens unknown protein. 31 1.8
AC007954-7|AAF62562.1| 250|Homo sapiens unknown protein. 31 1.8
BC126139-1|AAI26140.1| 215|Homo sapiens lens intrinsic membrane... 31 2.4
BC074917-1|AAH74917.1| 215|Homo sapiens lens intrinsic membrane... 31 2.4
BC074916-1|AAH74916.1| 215|Homo sapiens lens intrinsic membrane... 31 2.4
BC069430-1|AAH69430.1| 215|Homo sapiens lens intrinsic membrane... 31 2.4
AF340020-1|AAK26328.1| 173|Homo sapiens MP19 protein. 31 2.4
AF340019-1|AAK26327.1| 215|Homo sapiens MP19ins protein. 31 2.4
AF305941-1|AAG32328.1| 173|Homo sapiens LIM2 protein. 31 2.4
BC040487-1|AAH40487.1| 586|Homo sapiens hypothetical protein FL... 29 9.6
AK093092-1|BAC04050.1| 586|Homo sapiens protein. 29 9.6
>BC066965-1|AAH66965.1| 359|Homo sapiens C14orf148 protein protein.
Length = 359
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 236 FCV*FYPVWASK*KQQE*SRHICNASSNKSSIGSFRILIVGGSH 105
FC Y + AS K Q SRH+ S N ++ F++ I+GG H
Sbjct: 44 FCKLLYNLRASLNKNQS-SRHLSIGSLNSATPEEFKVGIIGGGH 86
>AF111168-1|AAD09625.1| 250|Homo sapiens unknown protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 236 FCV*FYPVWASK*KQQE*SRHICNASSNKSSIGSFRILIVGGSH 105
FC Y + AS K Q SRH+ S N ++ F++ I+GG H
Sbjct: 44 FCKLLYNLRASLNKNQS-SRHLSIGSLNSATPEEFKVGIIGGGH 86
>AC007954-7|AAF62562.1| 250|Homo sapiens unknown protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -2
Query: 236 FCV*FYPVWASK*KQQE*SRHICNASSNKSSIGSFRILIVGGSH 105
FC Y + AS K Q SRH+ S N ++ F++ I+GG H
Sbjct: 44 FCKLLYNLRASLNKNQS-SRHLSIGSLNSATPEEFKVGIIGGGH 86
>BC126139-1|AAI26140.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>BC074917-1|AAH74917.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>BC074916-1|AAH74916.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>BC069430-1|AAH69430.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>AF340020-1|AAK26328.1| 173|Homo sapiens MP19 protein.
Length = 173
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>AF340019-1|AAK26327.1| 215|Homo sapiens MP19ins protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>AF305941-1|AAG32328.1| 173|Homo sapiens LIM2 protein.
Length = 173
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 156 GASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLWEYC 278
G +V + L+++ A +W++ + F H GLW YC
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYC 46
>BC040487-1|AAH40487.1| 586|Homo sapiens hypothetical protein
FLJ35773 protein.
Length = 586
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 132 KASNATLVGASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLW 269
K S LVG ++ +AG L SF +W ++ S + LW
Sbjct: 427 KLSRTGLVGLGLSCLAGQLLYYSFLWSWWSVLPIQILSAISNRALW 472
>AK093092-1|BAC04050.1| 586|Homo sapiens protein.
Length = 586
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 132 KASNATLVGASITYVAGLFLLLSFAGPYWIESYTEMFSPFKHMGLW 269
K S LVG ++ +AG L SF +W ++ S + LW
Sbjct: 427 KLSRTGLVGLGLSCLAGQLLYYSFLWSWWSVLPIQILSAISNRALW 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,404,249
Number of Sequences: 237096
Number of extensions: 1461538
Number of successful extensions: 6275
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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