Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L14
(338 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 29 1.1
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 1.5
Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical pr... 28 1.5
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 28 2.0
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 28 2.0
U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical pr... 28 2.0
U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical pr... 28 2.0
U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical pr... 28 2.0
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 2.0
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 3.4
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 3.4
Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z11115-15|CAA77456.1| 316|Caenorhabditis elegans Hypothetical p... 27 3.4
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr... 27 4.5
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 27 4.5
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 27 4.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 26 6.0
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 26 6.0
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 26 6.0
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 26 6.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 26 6.0
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 26 6.0
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 26 7.9
U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2 ... 26 7.9
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 26 7.9
AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical ... 26 7.9
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 26 7.9
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 26 7.9
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 26 7.9
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 38 PAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPIT 217
PA P +IST V++ E + TTL S E E D+E++ +S +E EP
Sbjct: 719 PAPPPTTISTTTVIAGPVSAE---ATSTTLLSLE-EIGEAEMDIETNDEDDSIIEIEPSK 774
Query: 218 PKSESHAESDND 253
+ E +ND
Sbjct: 775 EVKPAPQEEEND 786
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 38 PAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPIT 217
PA P +IST V++ E + TTL S E E D+E++ +S +E EP
Sbjct: 719 PAPPPTTISTTTVIAGPVSAE---ATSTTLLSLE-EIGEAEMDIETNDEDDSIIEIEPSK 774
Query: 218 PKSESHAESDND 253
+ E +ND
Sbjct: 775 EVKPAPQEEEND 786
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 LSVDVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLES-SCSK 187
L++ +PP PT+ I LS E E+ ++S S E ++E+ S
Sbjct: 1686 LTIITQQKPPEKPTEDIGALSPLSPNTLAEYEEVPMMDMQSVPHSPQEKQEEIEALSEII 1745
Query: 188 ESPVEYEPITPKSESHAESDNDDV 259
E P + + ES E DN+ +
Sbjct: 1746 EEPQAMKEVEKPVESAPEKDNESL 1769
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 LSVDVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLES-SCSK 187
L++ +PP PT+ I LS E E+ ++S S E ++E+ S
Sbjct: 1686 LTIITQQKPPEKPTEDIGALSPLSPNTLAEYEEVPMMDMQSVPHSPQEKQEEIEALSEII 1745
Query: 188 ESPVEYEPITPKSESHAESDNDDV 259
E P + + ES E DN+ +
Sbjct: 1746 EEPQAMKEVEKPVESAPEKDNESL 1769
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 LSVDVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLES-SCSK 187
L++ +PP PT+ I LS E E+ ++S S E ++E+ S
Sbjct: 1686 LTIITQQKPPEKPTEDIGALSPLSPNTLAEYEEVPMMDMQSVPHSPQEKQEEIEALSEII 1745
Query: 188 ESPVEYEPITPKSESHAESDNDDV 259
E P + + ES E DN+ +
Sbjct: 1746 EEPQAMKEVEKPVESAPEKDNESL 1769
>Z49937-1|CAA90184.2| 670|Caenorhabditis elegans Hypothetical
protein F14F3.2 protein.
Length = 670
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 65 TPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSC 181
T E L + LE+++C K EW++ + G + S C
Sbjct: 3 TAEALDLITSLEQKECDDCGKKEVEWASVKKGTVICSEC 41
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 161 PDLESSCSKESPVEYEPITPKSESHAESDN 250
PDL+ + +P +P+TP S S + S N
Sbjct: 433 PDLKKPVNNSNPFISDPLTPSSSSSSSSHN 462
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 161 PDLESSCSKESPVEYEPITPKSESHAESDN 250
PDL+ + +P +P+TP S S + S N
Sbjct: 449 PDLKKPVNNSNPFISDPLTPSSSSSSSSHN 478
>U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical
protein F55C12.5c protein.
Length = 543
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 89 EQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESDNDDV*PH 268
EQ +K KE + G LE + K ++ ++ + ++H+E DV PH
Sbjct: 82 EQKDKVSIGSNDSGKKESEQSKIGALLEKAKKKT----HKLVSSRKKNHSECGTSDVSPH 137
Query: 269 PSKR 280
PS R
Sbjct: 138 PSMR 141
>U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical
protein F55C12.5a protein.
Length = 876
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 89 EQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESDNDDV*PH 268
EQ +K KE + G LE + K ++ ++ + ++H+E DV PH
Sbjct: 33 EQKDKVSIGSNDSGKKESEQSKIGALLEKAKKKT----HKLVSSRKKNHSECGTSDVSPH 88
Query: 269 PSKR 280
PS R
Sbjct: 89 PSMR 92
>U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical
protein F55C12.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 89 EQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESDNDDV*PH 268
EQ +K KE + G LE + K ++ ++ + ++H+E DV PH
Sbjct: 82 EQKDKVSIGSNDSGKKESEQSKIGALLEKAKKKT----HKLVSSRKKNHSECGTSDVSPH 137
Query: 269 PSKR 280
PS R
Sbjct: 138 PSMR 141
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 82 TKYLWCAD*VCRPGWWSCSN 23
TKY C+ VCRPG+++C N
Sbjct: 7 TKY--CSTRVCRPGYFNCGN 24
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2
Query: 101 KEKCSHTTLKSKEWSAHEPGPDLESSCSKES--PVEYEPITP--KSESHAESDNDDV*PH 268
K + T +K + S+ + D E + K + P + P T K+ES SD+D+ P
Sbjct: 510 KSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSDDDEDLPK 569
Query: 269 PSK 277
PSK
Sbjct: 570 PSK 572
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +2
Query: 101 KEKCSHTTLKSKEWSAHEPGPDLESSCSKES--PVEYEPITP--KSESHAESDNDDV*PH 268
K + T +K + S+ + D E + K + P + P T K+ES SD+D+ P
Sbjct: 785 KSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSDDDEDLPK 844
Query: 269 PSK 277
PSK
Sbjct: 845 PSK 847
>Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical
protein F59C6.2 protein.
Length = 239
Score = 27.1 bits (57), Expect = 3.4
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = -1
Query: 326 CKGCMFHLNHRCRHVSFCLDEVKHHH 249
C C++ ++H C H+ C+ H
Sbjct: 59 CDKCIYRMDHHCPHIGQCVGAHNQSH 84
>Z11115-15|CAA77456.1| 316|Caenorhabditis elegans Hypothetical
protein ZK637.11 protein.
Length = 316
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 50 TDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAH 151
TDS +T E++ ++L K SH+T + + W+AH
Sbjct: 66 TDSANTSEIV-IKKRLTFSKKSHSTSEIETWNAH 98
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/58 (22%), Positives = 26/58 (44%)
Frame = +2
Query: 164 DLESSCSKESPVEYEPITPKSESHAESDNDDV*PHPSKRRHXXXXXXXETYTPYTEQT 337
+L SK+ P E + K ++ + + DV PS++R + T + E++
Sbjct: 104 ELAEKRSKDGPAEPKKTPAKKKTEEKEEKGDVEATPSRKRKNEETLKSKRPTEFNEES 161
>Z54270-9|CAO82016.1| 787|Caenorhabditis elegans Hypothetical
protein F11C1.5c protein.
Length = 787
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 20 DVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLE 172
D A W + ++ S ++QLE +K K +EW+ H+ DL+
Sbjct: 518 DADAYEKVWNKVQAPSRKLASVIDQLEAKK------KEREWTKHQTSGDLD 562
>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical protein
F11C1.5a protein.
Length = 1804
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 20 DVGARPPAWPTDSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLE 172
D A W + ++ S ++QLE +K K +EW+ H+ DL+
Sbjct: 1535 DADAYEKVWNKVQAPSRKLASVIDQLEAKK------KEREWTKHQTSGDLD 1579
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 35 PPAWPTDSISTPEVLSYVEQL--EKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYE 208
PP P D P+ S VE L E+E T SK+++ E + S E V E
Sbjct: 416 PPTGPNDLNKVPDRQSAVESLKSEREASGIVTSSSKKYTRDEM-MAMRSDTKNEQSV--E 472
Query: 209 PITPKSES-HAESDNDD 256
I+ K E+ E++ D+
Sbjct: 473 EISAKIENLSVETETDE 489
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 35 PPAWPTDSISTPEVLSYVEQL--EKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYE 208
PP P D P+ S VE L E+E T SK+++ E + S E V E
Sbjct: 416 PPTGPNDLNKVPDRQSAVESLKSEREASGIVTSSSKKYTRDEM-MAMRSDTKNEQSV--E 472
Query: 209 PITPKSES-HAESDNDD 256
I+ K E+ E++ D+
Sbjct: 473 EISAKIENLSVETETDE 489
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 67 CAD*VCRPGWWSCSNIYR 14
CA C+ GW CS+ YR
Sbjct: 3788 CAQIECKKGWTRCSSSYR 3805
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical protein
C09G5.6 protein.
Length = 948
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/68 (23%), Positives = 25/68 (36%)
Frame = +2
Query: 53 DSISTPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSES 232
+ IS PE +EK + K+W H +L +S V E P +
Sbjct: 834 EDISKPEE-DKERAMEKHHKKPNKFQEKQWEEHRKSQELRNSREHGGQVPVETSVPMQQV 892
Query: 233 HAESDNDD 256
ES ++
Sbjct: 893 KPESSAEE 900
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 101 KEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESDNDD 256
KEK K ++ A + +SS +E EP+ K + SD+D+
Sbjct: 97 KEKVVKKDQKKQDKKADSDSEEDDSSDDEEKEETDEPVAKKQKKEESSDDDE 148
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 26.2 bits (55), Expect = 6.0
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 101 KEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKSESHAESDNDD 256
KEK K ++ A + +SS +E EP+ K + SD+D+
Sbjct: 115 KEKVVKKDQKKQDKKADSDSEEDDSSDDEEKEETDEPVAKKQKKEESSDDDE 166
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 67 CAD*VCRPGWWSCSNIYR 14
CA C+ GW CS+ YR
Sbjct: 3788 CAQIECKKGWTRCSSSYR 3805
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 26.2 bits (55), Expect = 6.0
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +2
Query: 98 EKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPITPKS 226
EKEK H K A+EPGP +S + E VE PKS
Sbjct: 1445 EKEKKEHRKEPKK---ANEPGPAPKSEKAVEKAVEKVEKKPKS 1484
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 107 KCSHTTLKSKEWSAHEPGPDLESSCSKESPV--EYEPI-TPKSESHA 238
KCS + K W ++ +L C K SP+ Y P+ P HA
Sbjct: 402 KCS--PVDDKRWWTYDDNEELAGMCGKSSPLIDGYYPVCDPDDPGHA 446
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 77 LSYVEQLEKEKCSHTTLKSKEWSAH 151
LS + +LE EKCS T ++ W+ H
Sbjct: 189 LSIMGKLEGEKCSAMTGLAERWAPH 213
>U49944-1|AAA93415.3| 508|Caenorhabditis elegans Long protein 2
protein.
Length = 508
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 227 RFWE*WAHIQL-VTLWNKSFLSQVLAHELTILLTSRLYVNTSPFLTARH 84
R W H+ +T KSFL + L+ + TI R+++ ++ A H
Sbjct: 269 REWAAKLHLMRNMTSTKKSFLDEFLSLKKTIFSVIRIFIERKSYVYAEH 317
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 65 TPEVLSYVEQLEKEKCSHTTLKSKEWSAHEPGPDLESSCSKESPVEYEPI 214
+P++ Y E +K SH KE HE ++ +K+ P+++ +
Sbjct: 831 SPKLQRYSEPQTMQKFSH---HQKEAQVHEKKNHMQQGSAKQEPIQHRQV 877
>AF039038-9|AAO12408.1| 559|Caenorhabditis elegans Hypothetical
protein K06A5.8d protein.
Length = 559
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 135 KNGQLMSQDLT*KALVPKSHQLNMSPSLPKANLMQSLTMMMFNL 266
K + MSQ +T L P +M PS+P+ + M T F L
Sbjct: 58 KFAEKMSQSMTMSMLPPADLTTSMFPSVPRGHPMSQSTAAGFCL 101
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 135 KNGQLMSQDLT*KALVPKSHQLNMSPSLPKANLMQSLTMMMFNL 266
K + MSQ +T L P +M PS+P+ + M T F L
Sbjct: 324 KFAEKMSQSMTMSMLPPADLTTSMFPSVPRGHPMSQSTAAGFCL 367
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 25.8 bits (54), Expect = 7.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 135 KNGQLMSQDLT*KALVPKSHQLNMSPSLPKANLMQSLTMMMFNL 266
K + MSQ +T L P +M PS+P+ + M T F L
Sbjct: 324 KFAEKMSQSMTMSMLPPADLTTSMFPSVPRGHPMSQSTAAGFCL 367
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 25.8 bits (54), Expect = 7.9
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = -1
Query: 329 LCKGCMFHLNHRCRHVSFCLDEVKHH 252
+C+ + C+ +FC+D+ HH
Sbjct: 41 ICEVRTYRETKHCKRCNFCIDDFDHH 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,581,246
Number of Sequences: 27780
Number of extensions: 146701
Number of successful extensions: 608
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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