Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_L13
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    22   5.6  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    22   5.6  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    22   5.6  

>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 327 IDIFDIIRNP 298
           IDIFDI RNP
Sbjct: 95  IDIFDIHRNP 104


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 342 ILARFIDIFDIIRNPGNGILNCANFFGEISFQTL 241
           +LA  +DI D  R+P +GI       G   F  L
Sbjct: 377 LLANVLDIDDDFRHPCSGISGSTTAIGGSVFTRL 410


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 342 ILARFIDIFDIIRNPGNGILNCANFFGEISFQTL 241
           +LA  +DI D  R+P +GI       G   F  L
Sbjct: 377 LLANVLDIDDDFRHPCSGISGSTTAIGGSVFTRL 410


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,831
Number of Sequences: 2352
Number of extensions: 4271
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)