Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L12
(385 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 118 6e-27
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 118 6e-27
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 118 6e-27
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 118 6e-27
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 118 6e-27
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 118 6e-27
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 115 6e-26
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 105 4e-23
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 105 4e-23
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 105 4e-23
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 105 4e-23
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 105 4e-23
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 41 0.002
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 41 0.002
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 40 0.002
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 40 0.002
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki... 40 0.004
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki... 40 0.004
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein. 40 0.004
AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens ... 38 0.011
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein. 38 0.011
BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein. 29 5.1
AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein. 29 5.1
U32376-1|AAB04949.1| 870|Homo sapiens channel associated protei... 29 6.8
AK126776-1|BAC86685.1| 749|Homo sapiens protein ( Homo sapiens ... 28 8.9
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 118 bits (284), Expect = 6e-27
Identities = 53/66 (80%), Positives = 62/66 (93%)
Frame = +1
Query: 130 SSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCL 309
+++TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+
Sbjct: 2 TTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCV 61
Query: 310 QYLDRA 327
QYLDRA
Sbjct: 62 QYLDRA 67
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 115 bits (276), Expect = 6e-26
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = +1
Query: 142 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCLQYLD 321
LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIR+KC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 322 RA 327
RA
Sbjct: 61 RA 62
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 105 bits (253), Expect = 4e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 127 SSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKC 306
S+S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIR+KC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 307 LQYLDRA 327
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 105 bits (253), Expect = 4e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 127 SSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKC 306
S+S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIR+KC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 307 LQYLDRA 327
+YLDRA
Sbjct: 63 TEYLDRA 69
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 105 bits (253), Expect = 4e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 127 SSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKC 306
S+S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIR+KC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 307 LQYLDRA 327
+YLDRA
Sbjct: 63 TEYLDRA 69
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 105 bits (253), Expect = 4e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 127 SSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKC 306
S+S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIR+KC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 307 LQYLDRA 327
+YLDRA
Sbjct: 63 TEYLDRA 69
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 105 bits (253), Expect = 4e-23
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 127 SSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKC 306
S+S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIR+KC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 307 LQYLDRA 327
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
+M+ + L A + A E D +++YE A Y++GV+ L + + ER +E+++
Sbjct: 43 DMTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKL 101
Query: 301 KCLQYLDRA 327
K +YL RA
Sbjct: 102 KITKYLRRA 110
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
+M+ + L A + A E D +++YE A Y++GV+ L + + ER +E+++
Sbjct: 43 DMTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKL 101
Query: 301 KCLQYLDRA 327
K +YL RA
Sbjct: 102 KITKYLRRA 110
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 142 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCLQYLD 321
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 322 RA 327
RA
Sbjct: 146 RA 147
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 142 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRSKCLQYLD 321
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 322 RA 327
RA
Sbjct: 146 RA 147
>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 221 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 279
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 280 RTAEYLMRA 288
>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 221 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 279
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 280 RTAEYLMRA 288
>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 221 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 279
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 280 RTAEYLMRA 288
>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ30238 fis, clone BRACE2002050. ).
Length = 255
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
+M+ + L A + A E +++YE A Y++GV+ L + + ER +E+++
Sbjct: 43 DMTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKL 101
Query: 301 KCLQYLDRA 327
K +YL RA
Sbjct: 102 KITKYLRRA 110
>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = +1
Query: 121 EMSSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRS 300
++ + L+KA +L+ ++++ +YE A Y GV+ L V+ E+ R +E+++
Sbjct: 233 KLGKRDYLEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKR 291
Query: 301 KCLQYLDRA 327
+ +YL RA
Sbjct: 292 RTAEYLMRA 300
>BC146785-1|AAI46786.1| 1556|Homo sapiens INOC1 protein protein.
Length = 1556
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 118 REMSSSNTLQKAIDL----VTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAK 285
R++ S+T Q+ ID+ V T+ED + N+ +A L Y +H + + E AK
Sbjct: 416 RKLEDSST-QRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAYHIHQARTRSFDEDAK 474
Query: 286 ES 291
ES
Sbjct: 475 ES 476
>AB033085-1|BAA86573.1| 1561|Homo sapiens KIAA1259 protein protein.
Length = 1561
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 118 REMSSSNTLQKAIDL----VTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAK 285
R++ S+T Q+ ID+ V T+ED + N+ +A L Y +H + + E AK
Sbjct: 421 RKLEDSST-QRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAYHIHQARTRSFDEDAK 479
Query: 286 ES 291
ES
Sbjct: 480 ES 481
>U32376-1|AAB04949.1| 870|Homo sapiens channel associated protein
of synapse protein.
Length = 870
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 139 TLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVK 258
+L+ +++ + TEE K Y+ A++L + EYF V+
Sbjct: 800 SLESLMEMNKRLTEEQAKKTYDRAIKLEQEFGEYFTAIVQ 839
>AK126776-1|BAC86685.1| 749|Homo sapiens protein ( Homo sapiens
cDNA FLJ44824 fis, clone BRACE3046491, highly similar
to Channel associated protein of synapse-110. ).
Length = 749
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 139 TLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVK 258
+L+ +++ + TEE K Y+ A++L + EYF V+
Sbjct: 679 SLEPLMEMNKRLTEEQAKKTYDRAIKLEQEFGEYFTAIVQ 718
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,392,069
Number of Sequences: 237096
Number of extensions: 790941
Number of successful extensions: 1576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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