Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L10
(385 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical pr... 82 1e-16
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 34 0.030
AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical... 30 0.64
Z74030-10|CAA98439.1| 317|Caenorhabditis elegans Hypothetical p... 29 1.1
AF047656-1|AAC05110.1| 230|Caenorhabditis elegans Lysozyme prot... 29 1.5
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 28 2.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 3.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 3.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 3.4
U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 27 4.5
U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 27 4.5
AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 27 4.5
AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 27 4.5
Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 26 7.9
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 26 7.9
>Z75533-7|CAA99820.1| 285|Caenorhabditis elegans Hypothetical
protein C54G4.8 protein.
Length = 285
Score = 82.2 bits (194), Expect = 1e-16
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +1
Query: 169 EQSVQASGSEAHPPHQPWSHDGWYKSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 348
E SV ASG HP PW+H G + S D ASVRRGYEVYKQVC ACHS++++ +R+ V+
Sbjct: 32 ENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFLHYRHFVDT 91
Query: 349 THT 357
T
Sbjct: 92 IMT 94
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 34.3 bits (75), Expect = 0.030
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -1
Query: 277 HNLVGHWHDPVTCTTHHGSMVGEEDELHYQMPALIVQAPIVVFLHHHQQCPMLKATIFYF 98
H V H D +C GSM ++DE HY + + ++ P+V H + +LKA F
Sbjct: 288 HYTVSHNFD--SCLQPDGSMQPKQDERHYPIAMMSIE-PLVRCKIQHVEYVLLKAICFCN 344
Query: 97 LSIPEHQWTADK 62
++PE A +
Sbjct: 345 PAVPELSQNAQR 356
>AF125442-11|AAD12791.1| 624|Caenorhabditis elegans Hypothetical
protein H04M03.1 protein.
Length = 624
Score = 29.9 bits (64), Expect = 0.64
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +2
Query: 164 RLNNQCRHLVVK---LILLTNHGAM--MGGTSHWIMPVSDEVMKCTNKCARLAIPCSI 322
RLN+ C+ +V + +++ N G + + G W+ P EV+ N C +L PC++
Sbjct: 19 RLNDVCQFIVPRQHNTLIVPNFGQVPVLKGDLTWLSP---EVLTFLNDCVQLMTPCAV 73
>Z74030-10|CAA98439.1| 317|Caenorhabditis elegans Hypothetical
protein D1054.11 protein.
Length = 317
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 145 HHHQQCPMLKATIFYFLSIPE 83
H H+QCP L+A + F IPE
Sbjct: 56 HRHKQCPRLRAYVGEFPGIPE 76
>AF047656-1|AAC05110.1| 230|Caenorhabditis elegans Lysozyme protein
10 protein.
Length = 230
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 188 LVVKLILLTNHGAMMGGTSHWIMPVSDEVMKCTNK 292
L+V LIL+T A G +I PVS E KC +K
Sbjct: 4 LIVLLILVTTINAAKNGID-FIQPVSVETFKCIHK 37
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -2
Query: 138 TNNAQC*KPQFSIFCPSLS----TSGQLTNLGCHKPIFFEKTCTTNPT 7
T N Q P+ S+FCP LS TS + L PIF + T N T
Sbjct: 231 TPNVQIPFPKPSVFCPLLSPEPATSSSTSGLQYSGPIFTPEFMTYNKT 278
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 245 HWIMPVSDEVM---KCTNKCARLAIPCSIL 325
++++P+SD+V+ KCT KC + IP I+
Sbjct: 4040 YFLLPLSDKVVIDEKCTLKCVVMGIPLVIV 4069
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 245 HWIMPVSDEVM---KCTNKCARLAIPCSIL 325
++++P+SD+V+ KCT KC + IP I+
Sbjct: 4040 YFLLPLSDKVVIDEKCTLKCVVMGIPLVIV 4069
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +2
Query: 245 HWIMPVSDEVM---KCTNKCARLAIPCSIL 325
++++P+SD+V+ KCT KC + IP I+
Sbjct: 4040 YFLLPLSDKVVIDEKCTLKCVVMGIPLVIV 4069
>U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform b protein.
Length = 883
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 77 LVLRDGQKIENCGFQHWALLVV 142
+ LR+G+K++ G HW L+VV
Sbjct: 730 MALREGRKLKKGGGLHWDLIVV 751
>U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform a protein.
Length = 956
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 77 LVLRDGQKIENCGFQHWALLVV 142
+ LR+G+K++ G HW L+VV
Sbjct: 730 MALREGRKLKKGGGLHWDLIVV 751
>AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion
transporter ABTS-4b protein.
Length = 936
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 77 LVLRDGQKIENCGFQHWALLVV 142
+ LR+G+K++ G HW L+VV
Sbjct: 730 MALREGRKLKKGGGLHWDLIVV 751
>AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion
transporter ABTS-4a protein.
Length = 956
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 77 LVLRDGQKIENCGFQHWALLVV 142
+ LR+G+K++ G HW L+VV
Sbjct: 730 MALREGRKLKKGGGLHWDLIVV 751
>Z74032-5|CAA98467.1| 219|Caenorhabditis elegans Hypothetical
protein F35B12.6 protein.
Length = 219
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 191 PDACTDCSSANSSVPTPPPTMPNVESHN 108
PD +D S+ S P PP +P + H+
Sbjct: 84 PDTISDDSADQSGSPNSPPFVPQGDGHD 111
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 152 VPTPPPTMPNVESHNFLFFVHP*APV 75
+P PPP+ P F FF P AP+
Sbjct: 287 IPIPPPSFPIFPFRPFPFFPMPMAPM 312
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 152 VPTPPPTMPNVESHNFLFFVHP*APV 75
+P PPP+ P F FF P AP+
Sbjct: 287 IPIPPPSFPIFPFRPFPFFPMPMAPM 312
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,409,722
Number of Sequences: 27780
Number of extensions: 226917
Number of successful extensions: 709
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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