Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L10
(385 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.30
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 2.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 2.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 2.8
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 3.7
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 3.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 3.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 6.5
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 6.5
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 6.5
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 20 8.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 20 8.6
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.30
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = -1
Query: 277 HNLVGHWHDPVTCTTHHGSMVGEEDELHYQMPALIVQAPIVVFL----HHHQQCP 125
H+ +GH H + T HH + P P + + HHH P
Sbjct: 416 HHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPHPP 470
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 58 QVCQLSTGAQGWTKNRKLWL 117
QVC L + GWT + ++L
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 58 QVCQLSTGAQGWTKNRKLWL 117
QVC L + GWT + ++L
Sbjct: 172 QVCSLRMASYGWTTDDLVFL 191
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 172 QSVQASGSEAHPPHQPWSHD 231
+++ SGS PP P +HD
Sbjct: 1849 RNIPVSGSPEPPPPPPRNHD 1868
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 3.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +2
Query: 200 LILLTNHGAMMGGTSHW 250
L N + GGT+HW
Sbjct: 254 LTATVNRNHLSGGTNHW 270
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 3.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 188 DACTDCSSANSSVPTPPPT 132
D C + N S P+PP T
Sbjct: 606 DVCVLKTDTNQSCPSPPVT 624
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 3.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +1
Query: 175 SVQASGSEAHPPHQPWSH 228
S +G ++ PPHQ H
Sbjct: 799 SKSVNGDQSQPPHQQLHH 816
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 220 WSHDGWYKSLDHASVRRGYEV 282
W++DG+ L H RG V
Sbjct: 170 WTYDGFQVDLRHIDEIRGKNV 190
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 304 KPCTLVCTLHNLVGH 260
KPC +C L N G+
Sbjct: 233 KPCPWICELTNDAGY 247
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 61 VCQLSTGAQGWTKNRK 108
+CQ T + GWT ++
Sbjct: 20 MCQTFTYSHGWTNGKR 35
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 20.2 bits (40), Expect = 8.6
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -3
Query: 158 SSVPTPPPTMPNVE 117
S +PT PP P ++
Sbjct: 101 SHIPTAPPIPPEIQ 114
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.2 bits (40), Expect = 8.6
Identities = 9/40 (22%), Positives = 18/40 (45%)
Frame = -1
Query: 157 VVFLHHHQQCPMLKATIFYFLSIPEHQWTADKPGVPQAHI 38
+++ H Q+C + ++ + QW D P V +I
Sbjct: 168 LIYPHDTQECKLQMESLSHTTDEMIFQWDPDVPLVVDENI 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,767
Number of Sequences: 438
Number of extensions: 2525
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9424380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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