Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_L09
         (240 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   2.6  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    21   4.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   4.5  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     21   4.5  
AY063775-1|AAL59657.1|   27|Anopheles gambiae glutathione S-tran...    21   6.0  
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    21   6.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    21   7.9  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 187  IPPPPPCKETSR 222
            +PPPPP   T R
Sbjct: 1078 LPPPPPSPRTER 1089


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 102 YAQCSIINEF*KQYPG 55
           YA+C   + F ++YPG
Sbjct: 84  YAECYCASGFVREYPG 99


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 20   NDKVLKKTSNGVPGYCF 70
            ND + + + N V G+C+
Sbjct: 1432 NDMLYQSSKNAVDGFCY 1448


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 23  DKVLKKTSNGVPGYCF 70
           ++VLK  S   PG CF
Sbjct: 62  ERVLKAKSESKPGACF 77


>AY063775-1|AAL59657.1|   27|Anopheles gambiae glutathione
           S-transferase 1-7 protein.
          Length = 27

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 178 LLIIPPPPPCK 210
           L  +PP PPC+
Sbjct: 5   LYYLPPSPPCR 15


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 178 LLIIPPPPPCK 210
           L  +PP PPC+
Sbjct: 5   LYYLPPSPPCR 15


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 240 KKRYTISRSFFTW 202
           +KRYT ++S F W
Sbjct: 265 RKRYTPNKSAFWW 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,131
Number of Sequences: 2352
Number of extensions: 4263
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)