Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L09
(240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical ... 27 1.3
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 27 2.3
AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical ... 26 4.1
Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical p... 25 5.4
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 23 6.2
Z81533-2|CAB04342.1| 432|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 25 9.5
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 25 9.5
AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane... 25 9.5
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 25 9.5
>AL132859-2|CAB60488.1| 315|Caenorhabditis elegans Hypothetical
protein Y39C12A.3 protein.
Length = 315
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 109 FILSTAPTVCVLFTQICCYNSNFLL 183
F+++ P +C L + +NSNFLL
Sbjct: 219 FVMAVFPIICTLTIVLDSFNSNFLL 243
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical
protein T23G5.2a protein.
Length = 719
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 160 CYNSNFLLIIPPPPPCKETSRN 225
C +S+F I PP PP T RN
Sbjct: 697 CRSSSFSSIAPPTPPTPGTPRN 718
>AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical
protein Y119C1B.3 protein.
Length = 450
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 109 FILSTAPTVCVLFTQICCYNSN 174
+I++TAP + +L T+IC + +N
Sbjct: 99 YIVATAPPIWILETRICNWRTN 120
>Z95559-10|CAB63364.2| 327|Caenorhabditis elegans Hypothetical
protein Y41E3.15 protein.
Length = 327
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 139 VLFTQICCYNSNFLLIIPPPPPCKETSRNGVTFF 240
V FT C+NS + P P KE S+ ++
Sbjct: 165 VFFTPTLCFNSGGMAWFPDPFSEKEPSKEAAEYY 198
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 190 PPPPPCKETSRNGVTF 237
PPPPP ++ + VTF
Sbjct: 366 PPPPPQTPSASSSVTF 381
Score = 20.6 bits (41), Expect(2) = 6.2
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +1
Query: 184 IIPPPPP 204
I+PPPPP
Sbjct: 322 ILPPPPP 328
>Z81533-2|CAB04342.1| 432|Caenorhabditis elegans Hypothetical
protein F36G9.3 protein.
Length = 432
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 28 SFKKNFQRRTGVLFLKLVYNRALGVDKFILSTAPTVCVLFTQICCYNSNFLLII 189
+F+ F R+ +LFL ++++ +G+++ + CV FT+ YN N L+ +
Sbjct: 212 TFRLLFTRK--MLFLIVIFSY-VGIEQSFWTGIYPTCVSFTRKLGYNGNALVAL 262
>Z95559-7|CAB76730.2| 329|Caenorhabditis elegans Hypothetical
protein Y41E3.14 protein.
Length = 329
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 130 TVCVLFTQICCYNSNFLLIIPPP 198
T + +T I C+NS L IP P
Sbjct: 162 TFILFYTPIICFNSKALAWIPEP 184
>Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical
protein C08B11.4 protein.
Length = 822
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 97 PMLYYKRVLKTIPRYAV 47
PM YYKR ++ P Y +
Sbjct: 469 PMYYYKRYIRITPTYII 485
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 163 YNSNFLLIIPPPP 201
YNS+F ++PPPP
Sbjct: 326 YNSSFCGLLPPPP 338
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 187 IPPPPPCKETSRNGVTF 237
IPPPPP NG+ +
Sbjct: 179 IPPPPPPHRKQENGIDY 195
>AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane
protein NRF-6 protein.
Length = 822
Score = 24.6 bits (51), Expect = 9.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 97 PMLYYKRVLKTIPRYAV 47
PM YYKR ++ P Y +
Sbjct: 469 PMYYYKRYIRITPTYII 485
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 130 TVCVLFTQICCYNS-NFLLIIPPPPPCKETSRN 225
T C+ C N+ N + PPPP ++ +R+
Sbjct: 273 TSCIALNTFSCNNTTNPFSTLTPPPPIQQKNRS 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,869,041
Number of Sequences: 27780
Number of extensions: 110332
Number of successful extensions: 295
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 12,740,198
effective HSP length: 59
effective length of database: 11,101,178
effective search space used: 222023560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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