Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L08
(494 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 190 3e-48
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 190 3e-48
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 190 3e-48
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 190 3e-48
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 188 1e-47
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 161 2e-39
X77278-1|CAA54493.1| 507|Homo sapiens HYL tyrosine kinase protein. 29 6.7
S75164-1|AAC60645.1| 507|Homo sapiens megakaryocyte-associated ... 29 6.7
S71669-1|AAB30995.1| 465|Homo sapiens lsk protein. 29 6.7
L18974-1|AAA16703.1| 527|Homo sapiens tyrosine kinase protein. 29 6.7
BC003109-1|AAH03109.1| 507|Homo sapiens megakaryocyte-associate... 29 6.7
BC000114-1|AAH00114.1| 507|Homo sapiens megakaryocyte-associate... 29 6.7
AC005777-1|AAC62843.1| 507|Homo sapiens MATK_HUMAN protein. 29 6.7
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 190 bits (462), Expect = 3e-48
Identities = 93/159 (58%), Positives = 111/159 (69%)
Frame = +3
Query: 18 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 197
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 198 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 377
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 378 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 494
LTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 190 bits (462), Expect = 3e-48
Identities = 93/159 (58%), Positives = 111/159 (69%)
Frame = +3
Query: 18 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 197
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 198 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 377
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 378 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 494
LTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 190 bits (462), Expect = 3e-48
Identities = 93/159 (58%), Positives = 111/159 (69%)
Frame = +3
Query: 18 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 197
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 198 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 377
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 378 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 494
LTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 190 bits (462), Expect = 3e-48
Identities = 93/159 (58%), Positives = 111/159 (69%)
Frame = +3
Query: 18 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 197
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 198 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 377
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 378 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 494
LTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 188 bits (457), Expect = 1e-47
Identities = 92/159 (57%), Positives = 110/159 (69%)
Frame = +3
Query: 18 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 197
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 198 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 377
+ LSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LCLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 378 LTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAP 494
LTFDQLAL +P G TVL+ G R RE RHFG APG P
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTP 159
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 161 bits (390), Expect = 2e-39
Identities = 77/121 (63%), Positives = 93/121 (76%)
Frame = +3
Query: 132 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 311
TN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 312 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGA 491
V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG APG
Sbjct: 76 KVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGT 135
Query: 492 P 494
P
Sbjct: 136 P 136
>X77278-1|CAA54493.1| 507|Homo sapiens HYL tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>S75164-1|AAC60645.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>S71669-1|AAB30995.1| 465|Homo sapiens lsk protein.
Length = 465
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 73 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 101
>L18974-1|AAA16703.1| 527|Homo sapiens tyrosine kinase protein.
Length = 527
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>BC003109-1|AAH03109.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>BC000114-1|AAH00114.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>AC005777-1|AAC62843.1| 507|Homo sapiens MATK_HUMAN protein.
Length = 507
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 435 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 349
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,326,686
Number of Sequences: 237096
Number of extensions: 1525141
Number of successful extensions: 6435
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6435
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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