Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L07
(330 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0540 + 9340379-9340592,9341250-9342988 64 3e-11
03_02_0546 - 9381989-9383733,9385838-9386054 62 8e-11
03_06_0484 + 34233042-34233258,34235317-34237049 62 1e-10
05_05_0109 - 22454539-22456268,22457069-22457279 61 2e-10
11_08_0075 + 28173220-28173433,28175348-28177083 60 4e-10
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 60 4e-10
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 58 1e-09
05_04_0052 - 17515344-17517353 51 2e-07
08_01_0654 - 5639419-5641449 50 3e-07
05_04_0392 - 20889699-20891726 50 4e-07
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 43 7e-05
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 42 9e-05
02_05_0655 + 30668706-30668849,30669043-30669471 29 0.89
07_03_0546 - 19325526-19326054,19327109-19327631,19327898-193281... 27 3.6
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 27 3.6
12_02_1202 - 26957254-26957778 27 4.7
01_01_0245 + 2013821-2014171,2014278-2014671,2015158-2015289,201... 27 4.7
11_04_0037 - 12642141-12642239,12643352-12643618,12643682-126437... 26 6.2
05_04_0308 - 20081366-20082404,20082702-20083078,20084293-200846... 26 6.2
04_01_0477 - 6221990-6223224,6227722-6228817 26 8.3
03_05_0584 - 25839566-25840255 26 8.3
02_04_0617 - 24422922-24422927,24423063-24423134,24423223-244233... 26 8.3
02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797 26 8.3
01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,929... 26 8.3
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 64.1 bits (149), Expect = 3e-11
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
I WLDSNQLA+ EE+E K KELEGVCNPII K+YQ
Sbjct: 584 ISWLDSNQLAEAEEFEDKMKELEGVCNPIIAKMYQ 618
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 62.5 bits (145), Expect = 8e-11
Identities = 25/37 (67%), Positives = 31/37 (83%)
Frame = -2
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
D IKWLD NQLA+ +E+E K KELE +CNPII+K+YQ
Sbjct: 583 DAIKWLDGNQLAEADEFEDKMKELESLCNPIISKMYQ 619
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 61.7 bits (143), Expect = 1e-10
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
I+WLD+NQLA+ EE+E K KELEG+CNPII K+YQ
Sbjct: 585 IQWLDNNQLAEVEEFEDKMKELEGLCNPIIAKMYQ 619
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
I WLD+NQLA+ +E+E K KELEG+CNPII K+YQ
Sbjct: 583 ISWLDTNQLAEADEFEDKMKELEGICNPIIAKMYQ 617
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 60.1 bits (139), Expect = 4e-10
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
I+WLD NQLA+ +E++ K KELEG+CNPII K+YQ
Sbjct: 584 IQWLDGNQLAEADEFDDKMKELEGICNPIIAKMYQ 618
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 60.1 bits (139), Expect = 4e-10
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
I WLDSNQLA+ +E+E K KELE +CNPII K+YQ
Sbjct: 776 INWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 810
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -2
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
+ ++WLD NQ A+KEEYE K KE+E VCNPII+ +YQ
Sbjct: 606 EALEWLDENQTAEKEEYEEKLKEVEAVCNPIISAVYQ 642
>05_04_0052 - 17515344-17517353
Length = 669
Score = 51.2 bits (117), Expect = 2e-07
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -2
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
+ +WLD NQ KEEYE K +ELE VCNP+++ +YQ
Sbjct: 613 EAYEWLDGNQDVGKEEYEEKLRELEDVCNPVMSAVYQ 649
>08_01_0654 - 5639419-5641449
Length = 676
Score = 50.4 bits (115), Expect = 3e-07
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = -2
Query: 329 DTIKWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
+ +WLD N A KEEYE K +ELE VCNP+++ +YQ
Sbjct: 616 EAYEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>05_04_0392 - 20889699-20891726
Length = 675
Score = 50.0 bits (114), Expect = 4e-07
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = -2
Query: 320 KWLDSNQLADKEEYEHKQKELEGVCNPIITKLYQ 219
+WLD N A KEEYE K +ELE VCNP+++ +YQ
Sbjct: 619 EWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQ 652
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 42.7 bits (96), Expect = 7e-05
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 320 KWLDSNQLADKEEYEHKQKELEGVCNPI 237
+WLD N A+KE+YE K KELE C P+
Sbjct: 608 EWLDGNPAAEKEDYEEKLKELEDACGPV 635
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 42.3 bits (95), Expect = 9e-05
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Frame = -2
Query: 329 DTIKWLDSN----QLADKEEYEHKQKELEGVCNPIITKLYQ 219
+ ++WL+ N + A+KE+YE K KE+E VC PII ++Y+
Sbjct: 611 EALEWLEDNDGGARTAEKEDYEEKLKEVEQVCGPIIKQVYK 651
>02_05_0655 + 30668706-30668849,30669043-30669471
Length = 190
Score = 29.1 bits (62), Expect = 0.89
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 239 SGCKHPPVPSACAHTLPYQPADSSR 313
S C PP+P+A A+T P+ SSR
Sbjct: 65 SPCSAPPLPTAAAYTPPHTNTPSSR 89
>07_03_0546 -
19325526-19326054,19327109-19327631,19327898-19328152,
19328283-19328472,19328473-19328525,19329295-19329555,
19329670-19329720,19329873-19330121,19330225-19330453,
19332245-19332559
Length = 884
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 99 VDLLDGGSGTSAGRCASRTGCS 164
++ DGG GT A SR GCS
Sbjct: 44 IESSDGGGGTPAAASGSRGGCS 65
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 114 GGSGTSAGRCASRTGCSARE 173
GGSG+ +GR +SR G ARE
Sbjct: 625 GGSGSGSGRGSSRGGGGARE 644
>12_02_1202 - 26957254-26957778
Length = 174
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 108 LDGGSGTSAGRCASRTGCS 164
+D +GTS+GR RTGCS
Sbjct: 58 IDVPAGTSSGRVWGRTGCS 76
>01_01_0245 +
2013821-2014171,2014278-2014671,2015158-2015289,
2015747-2015788,2016096-2017057
Length = 626
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 245 CKHPPVPSACAHTLPYQPADSSR 313
C HPPV C L +QP S+
Sbjct: 269 CIHPPVDEGCLRKLAWQPMTLSQ 291
>11_04_0037 -
12642141-12642239,12643352-12643618,12643682-12643750,
12643919-12644116,12644262-12644267
Length = 212
Score = 26.2 bits (55), Expect = 6.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 323 IKWLDSNQLADKEEYEHKQKE 261
+KW+DS L ++E + KQ++
Sbjct: 93 VKWIDSGALGEEEVVDEKQRQ 113
>05_04_0308 -
20081366-20082404,20082702-20083078,20084293-20084679,
20085038-20086000
Length = 921
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -2
Query: 317 WLDSNQLADKEEYEHKQKELEGVCN 243
W +++Q+ EE+ QK+ +GVCN
Sbjct: 195 WYENSQIIYFEEFFKTQKKGKGVCN 219
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 163 EHPVREAQRPAEVPDPPSRRSTKHST 86
EH R++QRP V P +R +H T
Sbjct: 363 EHDERKSQRPKRVSPPSARLWPRHFT 388
>03_05_0584 - 25839566-25840255
Length = 229
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 105 LLDGGSGTSAGRCASRTGCS 164
++D +GT+ GR +RTGCS
Sbjct: 54 VIDVPAGTTGGRVWARTGCS 73
>02_04_0617 -
24422922-24422927,24423063-24423134,24423223-24423324,
24423443-24423559,24423626-24423764,24423857-24423963,
24424052-24424161,24425749-24425882,24426005-24426145,
24426241-24426440,24426781-24426941,24427753-24427897
Length = 477
Score = 25.8 bits (54), Expect = 8.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 311 DSNQLADKEEYEHKQKELEGV 249
D NQL EEY+ +K L+GV
Sbjct: 285 DVNQLFSTEEYDKVEKALQGV 305
>02_02_0202 - 7742137-7744636,7744760-7744973,7745755-7745797
Length = 918
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 166 AEHPVREAQRPAEV-PDPPSRRSTKHSTINNY 74
A P + PA+V P P RRS +HS ++++
Sbjct: 17 ANPPPAPSTAPAQVRPTPSRRRSLQHSALHSF 48
>01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,
9293018-9293700,9295214-9297190,9298330-9298441,
9299848-9299904
Length = 1064
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 111 DGGSGTSAGRCASRTGCSARE 173
DG S AGR A TGC+ RE
Sbjct: 1042 DGRSLAKAGRKAGVTGCTGRE 1062
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,411,152
Number of Sequences: 37544
Number of extensions: 81402
Number of successful extensions: 449
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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