Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L06
(444 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 25 0.43
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 3.0
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 4.0
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 4.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.2
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 6.9
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 21 6.9
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 6.9
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 6.9
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 6.9
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 21 6.9
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 6.9
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 6.9
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 24.6 bits (51), Expect = 0.43
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 408 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEIYT 232
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 68 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAALPK 123
Query: 231 PSFL 220
S++
Sbjct: 124 ISYV 127
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 179 TANVSEDTVTLEFMRNDGVYISQL 250
T N S ++F+R+ G Y+ Q+
Sbjct: 51 TGNYSRLACEIQFVRSMGYYLIQI 74
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 370 HSRCYG*TETEKSWHCTCCG 429
+S C G T T W+ CG
Sbjct: 325 NSHCLGGTITRTMWYFQICG 344
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 420 RTVPGFFCLSLAIASGVMKSAW 355
R++P F CL L+ +++ +W
Sbjct: 215 RSIPAFTCLPLSDQLLLLEESW 236
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.4 bits (43), Expect = 4.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 420 RTVPGFFCLSLAIASGVMKSAW 355
R++P F CL L+ +++ +W
Sbjct: 215 RSIPAFTCLPLSDQLLLLEESW 236
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 5.2
Identities = 7/28 (25%), Positives = 18/28 (64%)
Frame = +2
Query: 107 IRPINLQLLINVRNQGGDVMQENITANV 190
++P + +++ N+RNQ +N+ +N+
Sbjct: 1249 VKPTSQKIVPNLRNQNLSHQAKNLDSNL 1276
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = +2
Query: 170 ENITANVSEDTVTLEFMRNDGVYISQLVDF 259
E N++ D + RN+G + ++ DF
Sbjct: 99 EGALCNINTDDCSPNPCRNNGSCVDRIADF 128
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 141 CGIKEVMLCRRT 176
CG+K++ CR T
Sbjct: 245 CGLKKIEFCRPT 256
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 13 NSKYLCL*QIFVFLKRDDGIYYTKNCISVSIYSSN 117
++ Y C+ I L D + +NC+ ++IY+++
Sbjct: 73 DASYKCMQYIQHPLPGQDYVIGQENCLYLTIYTTH 107
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 13 NSKYLCL*QIFVFLKRDDGIYYTKNCISVSIYSSN 117
++ Y C+ I L D + +NC+ ++IY+++
Sbjct: 73 DASYKCMQYIQHPLPGQDYVIGQENCLYLTIYTTH 107
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 13 NSKYLCL*QIFVFLKRDDGIYYTKNCISVSIYSSN 117
++ Y C+ I L D + +NC+ ++IY+++
Sbjct: 73 DASYKCMQYIQHPLPGQDYVIGQENCLYLTIYTTH 107
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 13 NSKYLCL*QIFVFLKRDDGIYYTKNCISVSIYSSN 117
++ Y C+ I L D + +NC+ ++IY+++
Sbjct: 73 DASYKCMQYIQHPLPGQDYVIGQENCLYLTIYTTH 107
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 13 NSKYLCL*QIFVFLKRDDGIYYTKNCISVSIYSSN 117
++ Y C+ I L D + +NC+ ++IY+++
Sbjct: 73 DASYKCMQYIQHPLPGQDYVIGQENCLYLTIYTTH 107
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 343 DSCRPGRLHHS 375
D CRPG H++
Sbjct: 262 DDCRPGACHNN 272
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,350
Number of Sequences: 336
Number of extensions: 2214
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9985735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -