Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L06
(444 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 27 0.070
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.28
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.28
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.49
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 0.49
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 0.49
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 3.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 4.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 4.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 4.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.1
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 27.5 bits (58), Expect = 0.070
Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 131 LINVRNQGGDVMQENITANVSEDTVTLEFMRNDGVYISQLVDFTNEVEAMKVVIPGEEEL 310
L+N + Q ++ +T+ ++ + L F + ++ + + + G EEL
Sbjct: 148 LVNEQGQTWHDLRVALTSELTAASTVLGFFPALNIVADSFIELIRR-QRVGYKVTGFEEL 206
Query: 311 G-QSGYQTLCFLTHAAQADFITPDAMAKLRQKNPGTVRV 424
+ G ++ C L F+ PD+ ++L + VR+
Sbjct: 207 AYKMGLESTCTLILGRHLGFLKPDSSSELATRLAEAVRI 245
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.4 bits (53), Expect = 0.28
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 440 PCPP-PQHVQCQDFSVS 393
P PP P H +C+D SVS
Sbjct: 440 PLPPLPLHTECEDLSVS 456
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.4 bits (53), Expect = 0.28
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 440 PCPP-PQHVQCQDFSVS 393
P PP P H +C+D SVS
Sbjct: 440 PLPPLPLHTECEDLSVS 456
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 0.49
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 408 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEIYT 232
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAALPK 276
Query: 231 PSFL 220
S++
Sbjct: 277 ISYV 280
Score = 20.6 bits (41), Expect = 8.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 179 TANVSEDTVTLEFMRNDGVYISQL 250
T N S ++F+R+ G Y+ Q+
Sbjct: 204 TGNYSRLACEIQFVRSMGYYLIQI 227
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 0.49
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 408 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEIYT 232
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 221 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAALPK 276
Query: 231 PSFL 220
S++
Sbjct: 277 ISYV 280
Score = 20.6 bits (41), Expect = 8.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 179 TANVSEDTVTLEFMRNDGVYISQL 250
T N S ++F+R+ G Y+ Q+
Sbjct: 204 TGNYSRLACEIQFVRSMGYYLIQI 227
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.6 bits (51), Expect = 0.49
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 408 GFFCLSLAIASG-VMKSAWAA*VKKQRVW*PLCPSSSSPGITTFIASTSLVKSTNCEIYT 232
G++ + + I SG ++ +W + + P+ + G+TT + T+L+ STN +
Sbjct: 160 GYYLIQIYIPSGLIVIISWVSFWLNRNA----TPARVALGVTTVLTMTTLMSSTNAALPK 215
Query: 231 PSFL 220
S++
Sbjct: 216 ISYV 219
Score = 20.6 bits (41), Expect = 8.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 179 TANVSEDTVTLEFMRNDGVYISQL 250
T N S ++F+R+ G Y+ Q+
Sbjct: 143 TGNYSRLACEIQFVRSMGYYLIQI 166
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 70 FHHLFSRKRKFVINTNIL 17
F H S +R+F ++T IL
Sbjct: 275 FFHPLSSRREFAVSTRIL 292
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 50 KTKICYKHKYFEFLPR 3
KT + Y HKY E LP+
Sbjct: 422 KTILDYYHKYKENLPK 437
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 50 KTKICYKHKYFEFLPR 3
KT + Y HKY E LP+
Sbjct: 422 KTILDYYHKYKENLPK 437
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 4.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 50 KTKICYKHKYFEFLPR 3
KT + Y HKY E LP+
Sbjct: 48 KTILDYYHKYKENLPK 63
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 6.1
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1
Query: 312 PSSSSPGITTFIASTSLVKSTNCEIYTPSFLINSRVT 202
P + + ITT +T+ +T TP+ N+ T
Sbjct: 651 PGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASAT 687
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,648
Number of Sequences: 438
Number of extensions: 2519
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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