Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_L05
         (504 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15266-1|CAA33337.1|  590|Homo sapiens muscarinic acetylcholine ...    31   1.7  
U29589-1|AAA70337.1|  590|Homo sapiens m3 muscarinic acetylcholi...    31   1.7  
BC121026-1|AAI21027.1|  590|Homo sapiens cholinergic receptor, m...    31   1.7  
BC096844-1|AAH96844.1|  590|Homo sapiens CHRM3 protein protein.        31   1.7  
AL356361-2|CAH72987.1|  590|Homo sapiens cholinergic receptor, m...    31   1.7  
AF498917-1|AAM18940.1|  590|Homo sapiens muscarinic acetylcholin...    31   1.7  
AF385589-1|AAK68114.1|  564|Homo sapiens m3 muscarinic cholinerg...    31   1.7  
AF279779-1|AAG30036.1|  384|Homo sapiens m3 muscarinic acetylcho...    31   1.7  
AB041395-1|BAA94480.1|  590|Homo sapiens muscarinic acetylcholin...    31   1.7  

>X15266-1|CAA33337.1|  590|Homo sapiens muscarinic acetylcholine
           receptor M3 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>U29589-1|AAA70337.1|  590|Homo sapiens m3 muscarinic acetylcholine
           receptor protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>BC121026-1|AAI21027.1|  590|Homo sapiens cholinergic receptor,
           muscarinic 3 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>BC096844-1|AAH96844.1|  590|Homo sapiens CHRM3 protein protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>AL356361-2|CAH72987.1|  590|Homo sapiens cholinergic receptor,
           muscarinic 3 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>AF498917-1|AAM18940.1|  590|Homo sapiens muscarinic acetylcholine
           receptor M3 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>AF385589-1|AAK68114.1|  564|Homo sapiens m3 muscarinic cholinergic
           receptor protein.
          Length = 564

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>AF279779-1|AAG30036.1|  384|Homo sapiens m3 muscarinic
           acetylcholine receptor protein.
          Length = 384

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


>AB041395-1|BAA94480.1|  590|Homo sapiens muscarinic acetylcholine
           receptor m3 protein.
          Length = 590

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +2

Query: 62  SAWYYPYFHSLKTILAFMLLLGHRFVIKTLNAKCHNISVYNKMLMCLHTS--ILWFLNMN 235
           + W   +   L  ILA + ++G+  VI +        +V N  L+ L  +  I+  ++MN
Sbjct: 64  TVWQVVFIAFLTGILALVTIIGNILVIVSFKVNKQLKTVNNYFLLSLACADLIIGVISMN 123

Query: 236 LVTQYIIL 259
           L T YII+
Sbjct: 124 LFTTYIIM 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,343,125
Number of Sequences: 237096
Number of extensions: 1447227
Number of successful extensions: 6801
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6792
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)