Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L04
(380 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation facto... 39 2e-05
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 25 0.19
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 4.2
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 4.2
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 4.2
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 4.2
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 4.2
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 5.5
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 5.5
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 20 7.3
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 20 7.3
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 20 9.6
>AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation factor
1-alpha protein.
Length = 56
Score = 38.7 bits (86), Expect = 2e-05
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPG 64
EVKSVEMHHEAL EAVPG
Sbjct: 39 EVKSVEMHHEALPEAVPG 56
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory
receptor candidate 15 protein.
Length = 455
Score = 25.4 bits (53), Expect = 0.19
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 15 SSPWKCTTRLYKKLYPVTMLV 77
SS + T+LY+KLYPV M +
Sbjct: 21 SSIYDKPTKLYQKLYPVLMFL 41
Score = 19.8 bits (39), Expect = 9.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 299 STTVDFLFDFGKI 261
S T++F+F FG I
Sbjct: 386 SQTINFMFSFGFI 398
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 275 DFGKICRLCGLCGNPIQVCIRLIF 204
D+ ++CRLC I + + F
Sbjct: 272 DYNRLCRLCKRVDEEISYIVLMSF 295
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 275 DFGKICRLCGLCGNPIQVCIRLIF 204
D+ ++CRLC I + + F
Sbjct: 272 DYNRLCRLCKRVDEEISYIVLMSF 295
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 4.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 275 DFGKICRLCGLCGNPIQVCIRLIF 204
D+ ++CRLC I + + F
Sbjct: 272 DYNRLCRLCKRVDEEISYIVLMSF 295
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.0 bits (42), Expect = 4.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 247 PHSLQILPKSKRKSTVVL 300
PH +QI P+S S+ +L
Sbjct: 17 PHRMQIKPQSPSSSSRIL 34
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.0 bits (42), Expect = 4.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 247 PHSLQILPKSKRKSTVVL 300
PH +QI P+S S+ +L
Sbjct: 17 PHRMQIKPQSPSSSSRIL 34
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 20.6 bits (41), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 168 KSAAPLGGLFFESP 127
K+ +P GG FE+P
Sbjct: 396 KAPSPYGGQMFEAP 409
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 20.6 bits (41), Expect = 5.5
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 123 LQEIRKTTHPGE 158
L+E +TTHP E
Sbjct: 346 LEEYTRTTHPNE 357
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 20.2 bits (40), Expect = 7.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = +3
Query: 318 NPKSIKSGDAAIVNLVPSK 374
NP + SG + ++P+K
Sbjct: 59 NPSRLDSGKELYIKIIPNK 77
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 20.2 bits (40), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 347 RHCQPGSLQAP 379
+H PGSLQ P
Sbjct: 137 KHPDPGSLQVP 147
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 19.8 bits (39), Expect = 9.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 238 PHSPHSLQILPKSKRKSTVVLVN 306
PH L LPK K+K + +V+
Sbjct: 208 PHKFQPLLRLPKFKKKPLLCVVS 230
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,254
Number of Sequences: 336
Number of extensions: 2297
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 7908675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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