Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L04
(380 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 151 1e-37
03_01_0547 + 4093196-4093657,4094267-4095148 151 1e-37
03_01_0544 + 4082528-4082989,4083585-4084466 151 1e-37
03_01_0543 + 4076981-4077442,4078145-4079026 151 1e-37
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 40 9e-04
02_04_0462 + 23131433-23132836 36 0.011
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 32 0.13
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 31 0.41
05_03_0250 + 10955281-10955419,10955524-10955727,10955985-109560... 30 0.71
11_06_0516 + 24502645-24504507 29 1.6
06_03_1311 - 29241884-29242054,29242802-29242879,29242968-292430... 29 1.6
10_08_1038 - 22485394-22485960,22486712-22487197 28 2.2
09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959 28 2.2
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749 28 2.2
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 2.9
11_06_0596 + 25385744-25388890 27 3.8
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 3.8
05_01_0128 + 866817-866859,867789-867874,868142-868231,868337-87... 27 5.0
03_05_0010 + 19622430-19622512,19622539-19623082,19623361-196237... 27 5.0
03_02_0332 + 7559469-7560892,7563193-7563298,7563403-7563491,756... 27 5.0
12_02_1265 - 27435096-27437675 27 6.6
11_01_0169 - 1365984-1366681,1368669-1368745,1369133-1369257,136... 27 6.6
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 6.6
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 27 6.6
03_05_0824 + 27980191-27980243,27980633-27980671,27980974-279820... 26 8.7
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 26 8.7
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 26 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 151 bits (367), Expect = 1e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQI NGY PVLDCHT+HIA KF
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 360 FAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPM 398
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 151 bits (367), Expect = 1e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQI NGY PVLDCHT+HIA KF
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 360 FAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPM 398
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 151 bits (367), Expect = 1e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQI NGY PVLDCHT+HIA KF
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 360 FAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPM 398
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 151 bits (367), Expect = 1e-37
Identities = 66/85 (77%), Positives = 78/85 (91%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++
Sbjct: 276 EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIM 335
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQI NGY PVLDCHT+HIA KF
Sbjct: 336 NHPGQIGNGYAPVLDCHTSHIAVKF 360
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+
Sbjct: 360 FAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPM 398
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 39.5 bits (88), Expect = 9e-04
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +2
Query: 2 HEAEVKSVEMH--HEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTA 175
++A VK + +H + ++ A PG+NV + + ++ G+V K NP ++F A
Sbjct: 218 NKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFRA 276
Query: 176 QVIVLN--HPGQISNGYTPVLDCHTAHIACK 262
Q+ +L + GY VL H+ C+
Sbjct: 277 QLQILELLDNAIFTAGYKAVLHIHSVVEECE 307
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.9 bits (79), Expect = 0.011
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 14 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN 193
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 194 HPGQIS---NGYTPVLDCHTAHI 253
G+ S GY P T +
Sbjct: 384 EGGRHSPFFPGYRPQFYMRTTDV 406
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 32.3 bits (70), Expect = 0.13
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
+V + + ++ A P +NV + + +++ G+V S NP +F AQ+ +L
Sbjct: 268 KVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQIL 326
Query: 191 N--HPGQISNGYTPVLDCHTAHIACK 262
+ GY VL H+ C+
Sbjct: 327 ELLDNAIFTAGYKAVLHIHSVVEECE 352
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 30.7 bits (66), Expect = 0.41
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Frame = +2
Query: 14 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL- 190
V VEM + L GDNVG ++ + +++RG V K + F A++ VL
Sbjct: 315 VTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLT 372
Query: 191 -----NHPGQISNGYTPVLDCHTAHIACK 262
H +SN Y+P TA + K
Sbjct: 373 KDEGGRHTAFLSN-YSPQFYFRTADVTGK 400
>05_03_0250 +
10955281-10955419,10955524-10955727,10955985-10956065,
10956147-10956287,10956378-10956410,10956809-10956909,
10957282-10957912,10959378-10959514
Length = 488
Score = 29.9 bits (64), Expect = 0.71
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 208 IKRIHTCIGLPHSPHSLQILPKSKRKSTVVLVNQQRTTLNPLNL 339
++ + T GLPH P + + KRK ++ ++R + L+L
Sbjct: 107 LRAVETVCGLPHPPRCVAAKSRKKRKVAMICRREERLYADTLSL 150
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 23 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 202
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 203 QISNG 217
+I G
Sbjct: 170 EIRRG 174
>06_03_1311 -
29241884-29242054,29242802-29242879,29242968-29243049,
29243141-29243212,29243316-29243437,29243541-29243596,
29244264-29244333,29244435-29244518,29244599-29244667,
29244855-29244928,29245014-29245125,29245220-29245510
Length = 426
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 247 PHSLQILPKSKRKSTVVLVNQQRTTLNPLNLVMP 348
P L P+ R+S + Q TT++P NLV+P
Sbjct: 96 PLDLTKRPRRNRRSPALRAAFQETTISPANLVLP 129
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 172 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 258
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>09_02_0484 + 9804351-9805203,9806204-9806760,9807243-9807959
Length = 708
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -2
Query: 346 ASPDLMDLGLSSVDLPVRRSTFSL 275
A+ DLM G+S V+LPVRR+ F++
Sbjct: 580 ATLDLMYSGISMVNLPVRRNHFAV 603
>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
Length = 135
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 2 HEAEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP 151
H+ ++KS M E QEA D V F K+ K++ Y+ KN+ P
Sbjct: 57 HKIQIKSANMKEEMRQEAFDIDRVAFE-KHTMEKDIVE-YIKEFDKNHGP 104
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 180 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 37
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 271 KSKRKSTVVLVNQQRTTLNPLNLVMPPLSTW 363
K+ K +N+ TTL L++ M P+S+W
Sbjct: 832 KANLKDLFAQINKLHTTLRSLSIRMKPVSSW 862
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 110 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 220
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>05_01_0128 +
866817-866859,867789-867874,868142-868231,868337-870214,
870606-870795,870888-871483
Length = 960
Score = 27.1 bits (57), Expect = 5.0
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 146 PPRGA----ADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFCRNQRESRPSYW*INR 313
PP+G+ + +Q++VL P +TPVL T+H N SRP + ++R
Sbjct: 309 PPKGSKSKGSSRRSQIVVLK-PNLQRKSFTPVLSSETSHFGEMSTNNC--SRPQHHCMHR 365
Query: 314 GQ 319
G+
Sbjct: 366 GR 367
>03_05_0010 +
19622430-19622512,19622539-19623082,19623361-19623767,
19623831-19624167,19624290-19624508,19625522-19625826,
19626128-19626287,19626422-19626547
Length = 726
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 273 IKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 371
IKE + R GKST D P +G I PS
Sbjct: 207 IKEAITTRGGKSTRDPPYPNPTGTNGIAREAPS 239
>03_02_0332 +
7559469-7560892,7563193-7563298,7563403-7563491,
7563780-7563841,7564247-7564278
Length = 570
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 297 YDGRLSL*FRQNLQAMWAVWQSNTGVYP 214
YD L R + +A WA WQ +YP
Sbjct: 459 YDSTQPLTLRPSSRAKWAAWQKLGNMYP 486
>12_02_1265 - 27435096-27437675
Length = 859
Score = 26.6 bits (56), Expect = 6.6
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 EAEVKSVEMHHE-ALQEAVPGDNVGFNVKNVSVKELRRGYV-AGDSKNNPPRGAADFTAQ 178
+A+ +++ H++ +L EA N N+ R GY + S + PP A+ +Q
Sbjct: 173 DAQPSNIKSHNQHSLPEAKMPYNPSVQ-NNLGKGVSRSGYAKSNQSFSGPPAMVANSPSQ 231
Query: 179 VIVLNHPGQISNGY 220
+ HPGQ Y
Sbjct: 232 IKNQRHPGQRHTNY 245
>11_01_0169 -
1365984-1366681,1368669-1368745,1369133-1369257,
1369338-1369426,1370041-1370126,1370705-1370970
Length = 446
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 371 GGNQVDNGGITRFNGF 324
GGN +DN G+T +N F
Sbjct: 379 GGNSMDNSGVTEYNLF 394
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 26.6 bits (56), Expect = 6.6
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 62 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 232
GD+ G V RR V GD + P + DF V++L H S+GY +L
Sbjct: 20 GDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHGYLVLL 72
>01_05_0309 -
20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 26.6 bits (56), Expect = 6.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 202 SNIKRIHTCIGLPHSPHSLQILPKSKRKSTVVLVNQQRTTL 324
S K + +CI L HSPH + K+T VLV++ L
Sbjct: 595 SKEKHLWSCIALSHSPHDIASFLWGP-KATGVLVHKNHLAL 634
>03_05_0824 +
27980191-27980243,27980633-27980671,27980974-27982023,
27983097-27983262,27983439-27983549,27983637-27983688,
27984691-27984859,27985604-27985883
Length = 639
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 188 LNHPGQISNGYTPVLDCHTAHIACK 262
L+ P +ISNG TPV D ++ C+
Sbjct: 271 LHRPRRISNGTTPVFDDNSGSHLCQ 295
>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
Length = 347
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 125 AGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFCRNQRESR 289
A SK GAA + +L P ++ Y P+ C H C C+ + +R
Sbjct: 63 AACSKGGGGGGAAAGSGVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKARVHNR 117
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 114 RRNSLTDTFLTLKPTLSPGTASCRAS 37
RR L D+F+ LK L PG+ + S
Sbjct: 242 RREKLNDSFVALKAVLPPGSKKDKTS 267
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,151,379
Number of Sequences: 37544
Number of extensions: 264418
Number of successful extensions: 727
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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