Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L04
(380 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 185 2e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 7e-48
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 176 8e-47
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 95 3e-22
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.69
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.8
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 6.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 8.5
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 8.5
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 20 8.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 8.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 185 bits (450), Expect = 2e-49
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVL
Sbjct: 288 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVL 347
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQISNGYTPVLDCHTAHIACKF
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKF 372
Score = 70.1 bits (164), Expect = 8e-15
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSKP+
Sbjct: 372 FADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPM 410
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (437), Expect = 7e-48
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL 190
EVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVL
Sbjct: 288 EVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVL 347
Query: 191 NHPGQISNGYTPVLDCHTAHIACKF 265
NHPGQISNGYTPVLDCHTAHIACKF
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKF 372
Score = 69.7 bits (163), Expect = 1e-14
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 380
FAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+KP+
Sbjct: 372 FAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPM 410
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 176 bits (428), Expect = 8e-47
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +2
Query: 17 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 196
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 197 PGQISNGYTPVLDCHTAHIACKF 265
PGQISNGYTPVLDCHTAHIACKF
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKF 83
Score = 66.1 bits (154), Expect = 1e-13
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 264 FAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 374
FAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 83 FAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 94.7 bits (225), Expect = 3e-22
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +2
Query: 11 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 142
EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 231 EVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.69
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 139 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHSP 249
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 95 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 202
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 283 KSTVVLVNQQRTTLNPLNLVM 345
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.7
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 66 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 188
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 283 KSTVVLVNQQRTTLNPLNLVM 345
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +1
Query: 283 KSTVVLVNQQRTTLNPLNLVM 345
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 6.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 142 QPTQGSCRLHSASHCAKSPRS 204
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 276 KEKVDRRTGKSTEDNPKSIKS 338
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 8.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 276 KEKVDRRTGKSTEDNPKSIKS 338
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 20.2 bits (40), Expect = 8.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 257 CKFCRNQRESRPSY 298
C FCRN E Y
Sbjct: 40 CVFCRNNGEEEAYY 53
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 8.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 307 QQRTTLNPLNLVMPPLSTW 363
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 283 KSTVVLVNQQRTTLNPLNLVM 345
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,705
Number of Sequences: 438
Number of extensions: 2535
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9300375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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