Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_L02
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal pro... 57 3e-09
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 28 1.4
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 28 1.4
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 28 1.4
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 28 1.4
AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical ... 28 1.9
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 27 3.3
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 27 4.4
Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 27 4.4
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 27 4.4
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 26 5.8
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 26 5.8
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 26 5.8
L23645-1|AAK26138.1| 582|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical pr... 26 7.7
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 26 7.7
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 26 7.7
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 26 7.7
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 26 7.7
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 26 7.7
AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein. 26 7.7
AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinas... 26 7.7
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 26 7.7
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 26 7.7
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 26 7.7
>AF003139-2|AAB54165.1| 244|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 7 protein.
Length = 244
Score = 57.2 bits (132), Expect = 3e-09
Identities = 27/79 (34%), Positives = 46/79 (58%)
Frame = +1
Query: 100 SKKLPAVPESVXXXXXXXXXXXXXXXQITLKRRSASIKKRKEIFKRAEQYVKEYRIKERD 279
+KK+P VPE+V Q + + + +K+ + FKRAE+YV+EYR +++
Sbjct: 4 TKKVPQVPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKE 63
Query: 280 EIRLARQARNRGNYCVPGE 336
+RL R+A +G++ VP E
Sbjct: 64 GLRLKREAEAKGDFYVPAE 82
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 220 KEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYC 324
K F+R+ Q +YR ++ + R++RNR YC
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQYC 206
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 220 KEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYC 324
K F+R+ Q +YR ++ + R++RNR YC
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQYC 206
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 220 KEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYC 324
K F+R+ Q +YR ++ + R++RNR YC
Sbjct: 169 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQYC 203
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 220 KEIFKRAEQYVKEYRIKERDEIRLARQARNRGNYC 324
K F+R+ Q +YR ++ + R++RNR YC
Sbjct: 172 KGFFRRSIQRKIDYRCLKQQVCEIKRESRNRCQYC 206
>AC006631-2|AAL02500.1| 142|Caenorhabditis elegans Hypothetical
protein F27B3.7 protein.
Length = 142
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +2
Query: 197 VPLPLRRGK-----KSLREPNNMSKNTASRSVMKSD 289
+PL +RR KS+ +P N+ NTA ++M SD
Sbjct: 25 IPLEIRRKHNLTQLKSMIDPQNLDDNTALEAIMNSD 60
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 179 RSHSRGVPLPLRRGKKSLREPNNMSKN 259
R +++G+ PLR KSLR+ N + K+
Sbjct: 233 RGNTKGLTAPLRHNFKSLRKRNGVGKS 259
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 179 RSHSRGVPLPLRRGKKSLREPNNMSKN 259
R +++G+ PLR KSLR+ N + K+
Sbjct: 255 RGNTKGLTAPLRHNFKSLRKRNGVGKS 281
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 179 RSHSRGVPLPLRRGKKSLREPNNMSKN 259
R +++G+ PLR KSLR+ N + K+
Sbjct: 257 RGNTKGLTAPLRHNFKSLRKRNGVGKS 283
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 285 DFITL-LDAVFFDILFGSLKDFFPLLNGS 202
DF++L FF ILFG+ +F L+NG+
Sbjct: 295 DFLSLGYRLAFFIILFGAFCEFVSLINGT 323
>Z81519-2|CAB04217.1| 468|Caenorhabditis elegans Hypothetical
protein F29C12.5 protein.
Length = 468
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 216 LLNGSGTPLECDLKTASSECL 154
L+ GSG P+E L A ECL
Sbjct: 240 LIEGSGKPMEIRLDIAEKECL 260
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 158 HSELAVFRSHSRGVPLPLRRGKKSLREPNNMSKNTASRSVMKSDWQDR 301
H L F SH+ + ++RG + + N+ + + +SVM + +R
Sbjct: 1427 HRSLLTFTSHAIRLECDIKRGFATFSDANSSHRFSIIQSVMNQSFNNR 1474
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 158 HSELAVFRSHSRGVPLPLRRGKKSLREPNNMSKNTASRSVMKSDWQDR 301
H L F SH+ + ++RG + + N+ + + +SVM + +R
Sbjct: 1427 HRSLLTFTSHAIRLECDIKRGFATFSDANSSHRFSIIQSVMNQSFNNR 1474
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +1
Query: 178 QITLKRRSASIKKRKEIFKRAEQYVK---EYRIKE---RDEIRLARQ 300
Q LK+R +K+R+EI ++ E+ + E +KE RD +R+++Q
Sbjct: 673 QEILKKREEDLKRRREIVEKKEEENRKRVEKELKELENRDLLRVSKQ 719
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 123 RNSWQLLTVLFTLHRFFLGRSLLFC 49
R+ W LL ++ T+H F LG S C
Sbjct: 2 RSLWMLLMLIGTIHAFLLGGSGCGC 26
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 211 KKRKEIFKRAEQYVKEYRIKERDEI-RLARQARNRGNY 321
K+RKEI K+ E V Y EI R+ R+ + NY
Sbjct: 552 KRRKEILKKIEGQVTSYEKNRPTEIERIHRRKKMLENY 589
>L23645-1|AAK26138.1| 582|Caenorhabditis elegans Hypothetical
protein F54F2.5a protein.
Length = 582
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 196 RSASIKKRKEIFKRAEQYVKEYRIKERDEI 285
R + +KR+EI+K Q V+E+R +EI
Sbjct: 323 RLQNFRKRQEIWKTMGQMVEEHRTDVHEEI 352
>Z83228-3|CAB60998.1| 536|Caenorhabditis elegans Hypothetical
protein F52F12.3 protein.
Length = 536
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 183 DLKTASSECLPPFTVLQD*FRN 118
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 202 ASIKKRKEIFKRAEQYVKEYRIKERDEI 285
+SI+++ E ++ +Q KEYR+K E+
Sbjct: 65 SSIEQKTEGSEKKQQLAKEYRVKVEQEL 92
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +2
Query: 164 ELAVFRSHSRGVPLPLRRGKKSLREPNNMSKNTASRSVMKSDWQDRLV 307
++A H GVP P R +SL E + K W+D ++
Sbjct: 355 DIAPTMLHIAGVPKPARMNGRSLLELVALKKKKKKHMTALKPWRDTIL 402
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 202 ASIKKRKEIFKRAEQYVKEYRIKERDEI 285
+SI+++ E ++ +Q KEYR+K E+
Sbjct: 65 SSIEQKTEGSEKKQQLAKEYRVKVEQEL 92
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 296 LANLISSRSLMRYSLTYCSALLKISFLFLM 207
L N++++ S+ + YC + +I+ LFLM
Sbjct: 661 LLNVLAAYSMFNTEVGYCQGMSQIAALFLM 690
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 296 LANLISSRSLMRYSLTYCSALLKISFLFLM 207
L N++++ S+ + YC + +I+ LFLM
Sbjct: 661 LLNVLAAYSMFNTEVGYCQGMSQIAALFLM 690
>AF145377-1|AAD39816.1| 536|Caenorhabditis elegans MOM-4 protein.
Length = 536
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 183 DLKTASSECLPPFTVLQD*FRN 118
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
>AF143242-1|AAD37359.1| 536|Caenorhabditis elegans protein kinase
MOM-4 protein.
Length = 536
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 183 DLKTASSECLPPFTVLQD*FRN 118
D++ SSEC+ FT+L+D + N
Sbjct: 291 DIRPTSSECVEYFTLLKDEYPN 312
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 25.8 bits (54), Expect = 7.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 187 LKRRSASIKKRKEIFKRAEQYVKEYRIKERDE 282
LKR+ KK+KE KRA+ K+ I+ R+E
Sbjct: 25 LKRKQQKSKKKKESKKRAKA-TKQAEIETREE 55
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 88 PSQVFSRPQPSFL*SQPSCCGIKLHAALV 2
P+ S P FL +P CC + +AAL+
Sbjct: 427 PASSASSPLSIFLIYRPPCCSVSENAALI 455
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Frame = +2
Query: 197 VPLPLRRGK-----KSLREPNNMSKNTASRSVMKSD 289
+PL LRR +SL +P N++ +T +++KSD
Sbjct: 25 IPLELRRNLNLSKLESLVDPRNLADDTVLEAILKSD 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.132 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,652,417
Number of Sequences: 27780
Number of extensions: 141838
Number of successful extensions: 560
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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