Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K21
(430 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.47
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 25 0.47
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 4.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 4.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 4.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 5.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 5.8
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.6 bits (51), Expect = 0.47
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 248 RTGSTFGASSKLPSTK**RRTSKQHSKKLTKQFAIID 358
R STFG+S++ +R K+H KK +K ++
Sbjct: 49 RRPSTFGSSNEALPQPISKRKDKEHKKKKSKTILAVN 85
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.6 bits (51), Expect = 0.47
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 248 RTGSTFGASSKLPSTK**RRTSKQHSKKLTKQFAIID 358
R STFG+S++ +R K+H KK +K ++
Sbjct: 49 RRPSTFGSSNEALPQPISKRKDKEHKKKKSKTILAVN 85
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 244 NTHGFNFWGKFQTAVNKMIKEDIEAALK 327
+++ F+G T K++ ++EAA K
Sbjct: 371 DSYNTEFYGSIDTLARKILGYNLEAASK 398
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 244 NTHGFNFWGKFQTAVNKMIKEDIEAALK 327
+++ F+G T K++ ++EAA K
Sbjct: 371 DSYNTEFYGSIDTLARKILGYNLEAASK 398
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 4.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -2
Query: 183 RFL*CIHSFRVVSKHGLRRPFQ 118
R+L H RV + GL+RP +
Sbjct: 139 RYLAICHPLRVYTISGLKRPIR 160
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 5.8
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 100 ITKICGLKGPPKTVFGDDPEAMDALQKSEQ 189
+ I GLK P +FGD ++ + Q
Sbjct: 527 VAGIVGLKMPRYCLFGDSVNTASRMEATSQ 556
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 127 PPKTVFGDDPEAMDALQKSEQEPALL 204
PP+ DD E A ++ E E ALL
Sbjct: 690 PPQVDEVDDKELSGAEEEKEVEKALL 715
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,392
Number of Sequences: 438
Number of extensions: 2352
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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