Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K20
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66133-1|CAA46925.1| 318|Homo sapiens AP endonuclease 1 protein. 88 9e-18
X59764-1|CAA42437.1| 318|Homo sapiens HAP1 protein. 88 9e-18
U79268-1|AAB50212.1| 318|Homo sapiens apurinic/apyrimidinic end... 88 9e-18
S43127-1|AAB22977.1| 318|Homo sapiens Ref-1 protein. 88 9e-18
M99703-1|AAA58373.1| 146|Homo sapiens class II AP endonuclease ... 88 9e-18
M92444-1|AAA58629.1| 318|Homo sapiens apurinic/apyrimidinic end... 88 9e-18
M81955-1|AAA58372.1| 318|Homo sapiens apurinic/apyrimidinic end... 88 9e-18
D13370-1|BAA02633.1| 318|Homo sapiens APEX nuclease protein. 88 9e-18
BT020133-1|AAV38935.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BT007236-1|AAP35900.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BC095428-1|AAH95428.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BC019291-1|AAH19291.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BC008145-1|AAH08145.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BC004979-1|AAH04979.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
BC002338-1|AAH02338.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
AF488551-1|AAL86909.1| 318|Homo sapiens APEX nuclease (multifun... 88 9e-18
D90373-1|BAA14381.1| 318|Homo sapiens apurinic/apyrimidinic end... 87 1e-17
M80261-1|AAA58371.1| 318|Homo sapiens apurinic endonuclease pro... 86 3e-17
AL031775-5|CAD92510.1| 304|Homo sapiens RP1-30M3.3 protein. 35 0.064
BC002959-1|AAH02959.1| 518|Homo sapiens APEX nuclease (apurinic... 33 0.26
AY884244-1|AAW56941.1| 518|Homo sapiens APEX nuclease (apurinic... 33 0.26
AL020991-3|CAI43126.1| 518|Homo sapiens APEX nuclease (apurinic... 33 0.26
AJ011311-1|CAB45242.1| 518|Homo sapiens AP endonuclease XTH2, p... 33 0.26
AF119046-1|AAD43041.1| 518|Homo sapiens APE2 protein protein. 33 0.26
AB049211-1|BAB13764.1| 518|Homo sapiens apurinic/apyrimidinic e... 33 0.26
AB021260-1|BAA78422.1| 518|Homo sapiens APEX nuclease-like 2 pr... 33 0.26
BC110375-1|AAI10376.1| 362|Homo sapiens TRAF and TNF receptor a... 33 0.34
BC017553-1|AAH17553.1| 362|Homo sapiens TRAF and TNF receptor a... 33 0.34
AY613922-1|AAT09764.1| 362|Homo sapiens TRAF and TNF receptor a... 33 0.34
AL031775-4|CAA21141.1| 362|Homo sapiens RP1-30M3.3 protein. 33 0.34
AK002168-1|BAA92119.1| 362|Homo sapiens protein ( Homo sapiens ... 33 0.34
AJ269473-1|CAB92966.1| 362|Homo sapiens TRAF and TNF receptor a... 33 0.34
AF223469-1|AAF64144.1| 362|Homo sapiens AD022 protein protein. 33 0.34
AF201687-1|AAG35600.1| 362|Homo sapiens ETS1-associated protein... 33 0.34
U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subuni... 30 2.4
AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta subu... 30 2.4
AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein... 30 2.4
>X66133-1|CAA46925.1| 318|Homo sapiens AP endonuclease 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>X59764-1|CAA42437.1| 318|Homo sapiens HAP1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>U79268-1|AAB50212.1| 318|Homo sapiens apurinic/apyrimidinic
endonuclease protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>S43127-1|AAB22977.1| 318|Homo sapiens Ref-1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>M99703-1|AAA58373.1| 146|Homo sapiens class II AP endonuclease
protein.
Length = 146
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>M92444-1|AAA58629.1| 318|Homo sapiens apurinic/apyrimidinic
endonuclease protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>M81955-1|AAA58372.1| 318|Homo sapiens apurinic/apyrimidinic
endonuclease protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>D13370-1|BAA02633.1| 318|Homo sapiens APEX nuclease protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BT020133-1|AAV38935.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BT007236-1|AAP35900.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BC095428-1|AAH95428.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BC019291-1|AAH19291.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BC008145-1|AAH08145.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BC004979-1|AAH04979.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>BC002338-1|AAH02338.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) 1 protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>AF488551-1|AAL86909.1| 318|Homo sapiens APEX nuclease
(multifunctional DNA repair enzyme) protein.
Length = 318
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDQKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>D90373-1|BAA14381.1| 318|Homo sapiens apurinic/apyrimidinic
endonuclease protein.
Length = 318
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/103 (50%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA-QGKDWNFKISCWNVDGIRAW 231
R PE K S+ A KK K A + + KT+ GK KI WNVDG+RAW
Sbjct: 18 RTEPEAKK-SKTAAKKND-KEAAGEGPALYEDPPDHKTSPSGKPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>M80261-1|AAA58371.1| 318|Homo sapiens apurinic endonuclease
protein.
Length = 318
Score = 85.8 bits (203), Expect = 3e-17
Identities = 50/103 (48%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +1
Query: 55 RKLPEEKALSEDANKK-VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGIRAW 231
R PE K A K + YE TS +A K KI WNVDG+RAW
Sbjct: 18 RTEPEAKKSKTAAKKNDKEAAGEGPALYEDPPDQKTSPSA--KPATLKICSWNVDGLRAW 75
Query: 232 LNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGY-HAY 357
+ K GLD+VK E PDILCLQE KCS++KLP EL LPG H Y
Sbjct: 76 IKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQY 118
>AL031775-5|CAD92510.1| 304|Homo sapiens RP1-30M3.3 protein.
Length = 304
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +1
Query: 94 NKKVPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVK 261
N V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 24 NNSVDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLA 83
Query: 262 YEKPDILCLQEI 297
PD++ LQE+
Sbjct: 84 LYSPDVIFLQEV 95
>BC002959-1|AAH02959.1| 518|Homo sapiens APEX nuclease
(apurinic/apyrimidinic endonuclease) 2 protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AY884244-1|AAW56941.1| 518|Homo sapiens APEX nuclease
(apurinic/apyrimidinic endonuclease) 2 protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AL020991-3|CAI43126.1| 518|Homo sapiens APEX nuclease
(apurinic/apyrimidinic endonuclease) 2 protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AJ011311-1|CAB45242.1| 518|Homo sapiens AP endonuclease XTH2,
putative protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AF119046-1|AAD43041.1| 518|Homo sapiens APE2 protein protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AB049211-1|BAB13764.1| 518|Homo sapiens apurinic/apyrimidinic
endonuclease 2 protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>AB021260-1|BAA78422.1| 518|Homo sapiens APEX nuclease-like 2
protein protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 274 DILCLQEIKCSKDKLPDELVNLPGYHAY 357
DI+CLQE K ++D L + L + GY++Y
Sbjct: 42 DIVCLQETKVTRDALTEPLAIVEGYNSY 69
>BC110375-1|AAI10376.1| 362|Homo sapiens TRAF and TNF receptor
associated protein protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>BC017553-1|AAH17553.1| 362|Homo sapiens TRAF and TNF receptor
associated protein protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AY613922-1|AAT09764.1| 362|Homo sapiens TRAF and TNF receptor
associated protein protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AL031775-4|CAA21141.1| 362|Homo sapiens RP1-30M3.3 protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AK002168-1|BAA92119.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ11306 fis, clone PLACE1010031. ).
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AJ269473-1|CAB92966.1| 362|Homo sapiens TRAF and TNF receptor
associated protein protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AF223469-1|AAF64144.1| 362|Homo sapiens AD022 protein protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>AF201687-1|AAG35600.1| 362|Homo sapiens ETS1-associated protein 2
protein.
Length = 362
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 103 VPLKNKATTSYEVIDFTNTSKTAQGKDWNFKISCWNVDGI----RAWLNKGGLDYVKYEK 270
V L N+ TT + + T Q F + WN+DG+ + +G Y+
Sbjct: 85 VDLTNEETTDSTTSKISPSEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYS 144
Query: 271 PDILCLQEI 297
PD++ LQE+
Sbjct: 145 PDVIFLQEV 153
>U91930-1|AAD03777.1| 1112|Homo sapiens AP-3 complex delta subunit
protein.
Length = 1112
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 1 ARGEDEHQNADEPTTKRRRKLPEEKALSEDANKKVP 108
A G+D+ + + +P K+ RK EE+ + +KK P
Sbjct: 819 AEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQP 854
>AC005545-2|AAC34214.1| 1079|Homo sapiens AP-3 complex delta
subunit, partial CDS protein.
Length = 1079
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 1 ARGEDEHQNADEPTTKRRRKLPEEKALSEDANKKVP 108
A G+D+ + + +P K+ RK EE+ + +KK P
Sbjct: 786 AEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQP 821
>AB208804-1|BAD92041.1| 1284|Homo sapiens Adapter-related protein
complex 3 delta 1 subunit variant protein.
Length = 1284
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 1 ARGEDEHQNADEPTTKRRRKLPEEKALSEDANKKVP 108
A G+D+ + + +P K+ RK EE+ + +KK P
Sbjct: 991 AEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQP 1026
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.132 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,138,341
Number of Sequences: 237096
Number of extensions: 750116
Number of successful extensions: 1651
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -