Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K20
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination ... 96 1e-20
AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p pro... 96 1e-20
AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombinatio... 96 1e-20
AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA ... 96 1e-20
AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-P... 29 2.3
AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-P... 29 2.3
AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein. 29 2.3
AY089412-1|AAL90150.1| 249|Drosophila melanogaster AT23505p pro... 27 5.3
AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p pro... 27 5.3
AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH0878... 27 5.3
AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-P... 27 5.3
AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB... 27 5.3
AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA... 27 5.3
AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-P... 27 9.3
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P... 27 9.3
>M62472-1|AAA62769.1| 679|Drosophila melanogaster recombination
repair protein protein.
Length = 679
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKA----LSEDANKKVPLK-NKATTSYEVIDFTNTSKTAQ 174
ED + A+E R RK KA + E++ K K KA T V +
Sbjct: 362 EDIEEAAEESKPARGRKKAAAKAEEPDVDEESGSKTTKKAKKAETKTTVTLDKDAFALPA 421
Query: 175 GKDWNFKISCWNVDGIRAWLNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGYHA 354
K++N KI WNV G+RAWL K GL + E+PDI CLQE KC+ D+LP+E+ LPGYH
Sbjct: 422 DKEFNLKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHP 481
Query: 355 Y 357
Y
Sbjct: 482 Y 482
>AY118605-1|AAM49974.1| 679|Drosophila melanogaster LP05366p
protein.
Length = 679
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKA----LSEDANKKVPLK-NKATTSYEVIDFTNTSKTAQ 174
ED + A+E R RK KA + E++ K K KA T V +
Sbjct: 362 EDIEEAAEESKPARGRKKAAAKAEEPDVDEESGSKTTKKAKKAETKTTVTLDKDAFALPA 421
Query: 175 GKDWNFKISCWNVDGIRAWLNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGYHA 354
K++N KI WNV G+RAWL K GL + E+PDI CLQE KC+ D+LP+E+ LPGYH
Sbjct: 422 DKEFNLKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHP 481
Query: 355 Y 357
Y
Sbjct: 482 Y 482
>AF073994-2|AAC27621.1| 679|Drosophila melanogaster recombination
repair protein 1 protein.
Length = 679
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKA----LSEDANKKVPLK-NKATTSYEVIDFTNTSKTAQ 174
ED + A+E R RK KA + E++ K K KA T V +
Sbjct: 362 EDIEEAAEESKPARGRKKAAAKAEEPDVDEESGSKTTKKAKKAETKTTVTLDKDAFALPA 421
Query: 175 GKDWNFKISCWNVDGIRAWLNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGYHA 354
K++N KI WNV G+RAWL K GL + E+PDI CLQE KC+ D+LP+E+ LPGYH
Sbjct: 422 DKEFNLKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHP 481
Query: 355 Y 357
Y
Sbjct: 482 Y 482
>AE014134-522|AAF51175.1| 679|Drosophila melanogaster CG3178-PA
protein.
Length = 679
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKA----LSEDANKKVPLK-NKATTSYEVIDFTNTSKTAQ 174
ED + A+E R RK KA + E++ K K KA T V +
Sbjct: 362 EDIEEAAEESKPARGRKKAAAKAEEPDVDEESGSKTTKKAKKAETKTTVTLDKDAFALPA 421
Query: 175 GKDWNFKISCWNVDGIRAWLNKGGLDYVKYEKPDILCLQEIKCSKDKLPDELVNLPGYHA 354
K++N KI WNV G+RAWL K GL + E+PDI CLQE KC+ D+LP+E+ LPGYH
Sbjct: 422 DKEFNLKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHP 481
Query: 355 Y 357
Y
Sbjct: 482 Y 482
>AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-PA
protein.
Length = 1240
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 16 EHQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVI 144
+ Q DE ++ KLP+ + L E N++ +SYE +
Sbjct: 865 QKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSYETV 907
>AE013599-1058|AAF58816.2| 2376|Drosophila melanogaster CG18408-PA,
isoform A protein.
Length = 2376
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKT 168
E + + +EP+ K +LPE LSEDA +K + Y+ +D++ T
Sbjct: 207 ETKEERENEPSPK---ELPESSHLSEDAQQKHVEVEENQQVYDEVDYSKDETT 256
>AB053478-1|BAB62017.1| 2376|Drosophila melanogaster DCAPL1 protein.
Length = 2376
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKT 168
E + + +EP+ K +LPE LSEDA +K + Y+ +D++ T
Sbjct: 207 ETKEERENEPSPK---ELPESSHLSEDAQQKHVEVEENQQVYDEVDYSKDETT 256
>AY089412-1|AAL90150.1| 249|Drosophila melanogaster AT23505p
protein.
Length = 249
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDAN 96
EDE+ D P+T ++R+L E E+A+
Sbjct: 194 EDEYITDDAPSTSKKRRLNENNEFIEEAD 222
>AY061453-1|AAL29001.1| 985|Drosophila melanogaster LD39136p protein.
Length = 985
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDAN 96
EDE+ D P+T ++R+L E E+A+
Sbjct: 930 EDEYITDDAPSTSKKRRLNENNEFIEEAD 958
>AF145652-1|AAD38627.1| 499|Drosophila melanogaster BcDNA.GH08789
protein.
Length = 499
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 HQN-ADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTAQ 174
H N +D P R K +++ L + N + L + TS+++ DF ++ A+
Sbjct: 336 HLNVSDPPIPTPRAKREQQQPLEDSMNDLISLDDSNNTSFDLEDFDPLNQNAR 388
>AE013599-1040|AAF58831.2| 985|Drosophila melanogaster CG18011-PA
protein.
Length = 985
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDAN 96
EDE+ D P+T ++R+L E E+A+
Sbjct: 930 EDEYITDDAPSTSKKRRLNENNEFIEEAD 958
>AE013599-801|AAF58981.2| 499|Drosophila melanogaster CG18659-PB,
isoform B protein.
Length = 499
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 HQN-ADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTAQ 174
H N +D P R K +++ L + N + L + TS+++ DF ++ A+
Sbjct: 336 HLNVSDPPIPTPRAKREQQQPLEDSMNDLISLDDSNNTSFDLEDFDPLNQNAR 388
>AE013599-800|AAM68810.2| 908|Drosophila melanogaster CG18659-PA,
isoform A protein.
Length = 908
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 19 HQN-ADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTAQ 174
H N +D P R K +++ L + N + L + TS+++ DF ++ A+
Sbjct: 745 HLNVSDPPIPTPRAKREQQQPLEDSMNDLISLDDSNNTSFDLEDFDPLNQNAR 797
>AE014134-2984|AAF53715.3| 1377|Drosophila melanogaster CG10600-PA
protein.
Length = 1377
Score = 26.6 bits (56), Expect = 9.3
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +1
Query: 10 EDEHQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTA 171
E E + + T ++ P + +LSE + K+P N T + +T +A
Sbjct: 1020 EKEKEKEKKNDTPKKHATPAKSSLSEPSPAKIPKLNNDTAPATALPLKSTPSSA 1073
>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
protein.
Length = 1701
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 19 HQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTAQ 174
H+ +EPTTK+ P K + + P K +T+ + T KT +
Sbjct: 740 HKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRKTTE 791
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 19 HQNADEPTTKRRRKLPEEKALSEDANKKVPLKNKATTSYEVIDFTNTSKTAQ 174
H+ +EPTTK+ P K + + P K +T+ + T KT +
Sbjct: 940 HKTTEEPTTKKTTHEPTTKKSTTLKPTEEPTTRKTSTTKTTREPTTKRKTTE 991
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.312 0.132 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,215
Number of Sequences: 53049
Number of extensions: 261360
Number of successful extensions: 721
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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