BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K19
(300 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent ... 23 2.5
AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein. 23 2.5
AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein. 23 2.5
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 23 3.3
AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled ... 23 3.3
AY062192-1|AAL58553.1| 151|Anopheles gambiae cytochrome P450 CY... 22 4.3
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 22 4.3
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 22 5.7
>DQ999006-1|ABJ99082.1| 282|Anopheles gambiae voltage-dependent
anion channel protein.
Length = 282
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 221 KYLLKSYGQNHRSKW 177
KY +K YG N KW
Sbjct: 60 KYKVKEYGLNFSEKW 74
>AY137768-1|AAN16031.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 221 KYLLKSYGQNHRSKW 177
KY +K YG N KW
Sbjct: 60 KYKVKEYGLNFSEKW 74
>AY082909-1|AAL89811.1| 282|Anopheles gambiae porin protein.
Length = 282
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 221 KYLLKSYGQNHRSKW 177
KY +K YG N KW
Sbjct: 60 KYKVKEYGLNFSEKW 74
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 70 LYYKDPTFCLNKYYSDFENSCP 135
+Y+KD C N S + CP
Sbjct: 206 VYFKDAKLCQNGTKSMYNGRCP 227
>AY553322-1|AAT36323.1| 426|Anopheles gambiae G-protein coupled
receptor 4 protein.
Length = 426
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 13 RWHLGNARCS*LFFSVRIILY 75
+WH GN C F LY
Sbjct: 142 QWHAGNVACKVFLFMRAFCLY 162
>AY062192-1|AAL58553.1| 151|Anopheles gambiae cytochrome P450
CYP4H17 protein.
Length = 151
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 135 SNNIFDLETNPKVSP 179
S NIF++ NPKV P
Sbjct: 101 SLNIFNVHRNPKVFP 115
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein
protein.
Length = 1036
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 30 CAVFLIILFCAYNIVLQRP 86
CA+ IILF Y+ V+ P
Sbjct: 10 CALIFIILFSTYDSVVLYP 28
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 217 YFCFVWSPT 243
Y C VWSPT
Sbjct: 902 YSCVVWSPT 910
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,952
Number of Sequences: 2352
Number of extensions: 6545
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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