Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_K19
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD...    27   4.4  
Y13092-1|CAA73533.1|  939|Drosophila melanogaster alpha-adaptin ...    26   7.7  
Y11104-1|CAA71991.1|  940|Drosophila melanogaster alpha-adaptin ...    26   7.7  
BT003458-1|AAO39461.1|  799|Drosophila melanogaster RH30202p pro...    26   7.7  
AE014134-99|AAS64634.1|  952|Drosophila melanogaster CG4260-PB, ...    26   7.7  
AE014134-98|AAF56103.2|  940|Drosophila melanogaster CG4260-PA, ...    26   7.7  

>AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD
           protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
 Frame = +1

Query: 55  SVRII-LYYKDPTFCLNKY-----YSDF--ENSCPVIIFLT*KLTQ 168
           SV ++ +Y+KDPTF  NK      +SDF  E S  ++ FL  + TQ
Sbjct: 468 SVAVVNMYFKDPTFRANKQTEFIGFSDFLCEFSIYLLFFLRQEFTQ 513


>Y13092-1|CAA73533.1|  939|Drosophila melanogaster alpha-adaptin
           protein.
          Length = 939

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 217 TYSNRMVKITGQNGDTFGLVSKSKILLLGNCFRNLSNIY*GKMW 86
           ++SN + K+   +GDT  +V +S  L L   FR+  +I  G  W
Sbjct: 145 SFSNEIPKLL-VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW 187


>Y11104-1|CAA71991.1|  940|Drosophila melanogaster alpha-adaptin
           protein.
          Length = 940

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 217 TYSNRMVKITGQNGDTFGLVSKSKILLLGNCFRNLSNIY*GKMW 86
           ++SN + K+   +GDT  +V +S  L L   FR+  +I  G  W
Sbjct: 145 SFSNEIPKLL-VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW 187


>BT003458-1|AAO39461.1|  799|Drosophila melanogaster RH30202p
           protein.
          Length = 799

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 217 TYSNRMVKITGQNGDTFGLVSKSKILLLGNCFRNLSNIY*GKMW 86
           ++SN + K+   +GDT  +V +S  L L   FR+  +I  G  W
Sbjct: 4   SFSNEIPKLL-VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW 46


>AE014134-99|AAS64634.1|  952|Drosophila melanogaster CG4260-PB,
           isoform B protein.
          Length = 952

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 217 TYSNRMVKITGQNGDTFGLVSKSKILLLGNCFRNLSNIY*GKMW 86
           ++SN + K+   +GDT  +V +S  L L   FR+  +I  G  W
Sbjct: 157 SFSNEIPKLL-VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW 199


>AE014134-98|AAF56103.2|  940|Drosophila melanogaster CG4260-PA,
           isoform A protein.
          Length = 940

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 217 TYSNRMVKITGQNGDTFGLVSKSKILLLGNCFRNLSNIY*GKMW 86
           ++SN + K+   +GDT  +V +S  L L   FR+  +I  G  W
Sbjct: 145 SFSNEIPKLL-VSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEW 187


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,114,302
Number of Sequences: 53049
Number of extensions: 258383
Number of successful extensions: 499
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)