Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K16
(399 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein L27|Schizosac... 123 9e-30
SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein L27|Schizosacch... 122 2e-29
SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces p... 28 0.46
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 28 0.61
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 28 0.61
SPBC8D2.12c |||mitochondrial DNA binding protein |Schizosaccharo... 27 0.81
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 27 1.1
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 27 1.1
SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces ... 26 1.9
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 2.5
SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|ch... 26 2.5
SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 25 3.3
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 25 3.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 3.3
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 25 4.3
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 25 5.7
SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces p... 25 5.7
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 5.7
SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyce... 24 7.6
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 24 7.6
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 24 7.6
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 24 7.6
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 24 7.6
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 24 10.0
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 24 10.0
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 24 10.0
>SPBC685.07c |rpl2701|rpl27-1|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 123 bits (297), Expect = 9e-30
Identities = 55/113 (48%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M KI+KPGKV L+ GR+A +K ++++ D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRLT 357
+I +RS++KPF+K VNYNHLMPTRY+++ K +A K+P +R R T
Sbjct: 61 RIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKT 113
>SPCC74.05 |rpl2702|rpl27-2|60S ribosomal protein
L27|Schizosaccharomyces pombe|chr 3|||Manual
Length = 136
Score = 122 bits (295), Expect = 2e-29
Identities = 54/113 (47%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
M KI+KPGKV LV GR+A +K ++++N D+G+ P+GHA VAG++RYP KV K MG
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEK--FSAKDLKDPAKRKKLRLT 357
+I KRS++KPF+K +NYNHLMPTRY+++ K + +P++R + T
Sbjct: 61 RIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKT 113
>SPCC622.18 |rpl6||60S ribosomal protein L6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 195
Score = 28.3 bits (60), Expect = 0.46
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +1
Query: 16 PSKMGKIMKPGKVVLVLSGRYARRKAIVVKNYDE 117
P+K+ + PG V ++L+GR+ ++ +V+ ++
Sbjct: 45 PTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED 78
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 27.9 bits (59), Expect = 0.61
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 18 IQDG*DYETWKSGAGPQRPVR 80
++ G + E WKSGAG Q P++
Sbjct: 432 VRGGMEVEVWKSGAGAQLPMK 452
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 27.9 bits (59), Expect = 0.61
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 196 GKNKIHKRSKIKPFVKGVNYNHLMPTR-YSVDFSFEKFSAKDLKDPAKRKKLRLTQGSVS 372
G + I R K P K VNYNH + S +F K D+ DP + + G++
Sbjct: 28 GNHWIFARFKFYPLNKIVNYNHFHSSSCQSEAKNFYKQFEGDISDPPPKGPFDIDLGALK 87
Query: 373 KRDTRAERT 399
R +T
Sbjct: 88 SSYLRKMKT 96
>SPBC8D2.12c |||mitochondrial DNA binding protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 0.81
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 78 VPAAEDQHHFSRFHNLTHLGWI 13
+P +HFSRF + T GWI
Sbjct: 7 IPFTRALYHFSRFRSFTTSGWI 28
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 1.1
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 226 IKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRLTQGSVSKRDTR--AER 396
+ PF K Y H + T S S KF +P+ KK +LT +RDTR AER
Sbjct: 39 VSPFFKKERYKHHLETNVSSHQSATKFIE---PEPSPTKKTKLT-----RRDTRPLAER 89
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.1 bits (57), Expect = 1.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 13 YPSKMGKIMKPGKVVLVLSGRYARRKAIVVKNYD 114
Y ++ G + GK+V+++SG AR K+ + + D
Sbjct: 40 YSTESGMLFHAGKLVIIMSGLPARGKSNIAVSID 73
>SPCC31H12.02c |mug73||membrane transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 26.2 bits (55), Expect = 1.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -2
Query: 152 TKACPYGLSDV-PSS*FFTTMALRRAY--RPLRTSTTFPGFIIL 30
T AC YGL +V S+ FF +++R Y R ++ FP I++
Sbjct: 73 TMACNYGLKNVFSSASFFREVSVRMVYYVRYIQWLINFPLIIVM 116
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 25.8 bits (54), Expect = 2.5
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 217 RSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPAKRKKLRLTQGSVSKRDTRAER 396
R ++ + GV+ N +P F K K + +K+K L+Q + KR+ E+
Sbjct: 249 RQFVEVYRNGVSQNWHVPCHMIYKFWNVKLCQKTSIETSKKKDSELSQSQLRKREKHLEQ 308
>SPBC530.08 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 2.5
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 253 YNHLMPT-RYSVDFSFEKFSAKDLKDPAKRKKLRLTQGSVS 372
Y PT R+S+DF ++++ P + L +T+ +VS
Sbjct: 195 YQFFTPTPRFSIDFMVSSVDPREIQLPGIEEALCITKAAVS 235
>SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 3.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 131 LSDVPSS*FFTTMALRRAYRPLRTSTTFPG 42
L ++P + FF T+ AY P S T G
Sbjct: 689 LEEIPYNKFFKTVEKNEAYNPSSKSATIDG 718
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 25.4 bits (53), Expect = 3.3
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 207 FIFSHPFMNLARVSVDAGDESMSVWFVRCALVVILYDNGFT 85
FI F ++ D ESM F+R A +++ Y G T
Sbjct: 1092 FICQQVFQSVILAIHDPYFESMQSDFIRLACIILSYSQGIT 1132
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 3.3
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 160 IDRYPRKVHKRMGKN--KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKDPA 333
+DR R + + K+ +I+ + + P ++G L+ + SFE S KD+K P
Sbjct: 450 VDRNSRGIEGFLKKSNDEIYMSTSVSPSIEG--RAKLLNENMRENNSFELSSEKDIKSPK 507
Query: 334 KRKK 345
+ K+
Sbjct: 508 RLKR 511
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 196 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKF 306
G+ KIH + +++ N+ H+ TR+ F KF
Sbjct: 85 GEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKF 121
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 24.6 bits (51), Expect = 5.7
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 253 YNHL--MPTRYSVDFSFEKFSAKDLKDPAKRKKLRLTQGSVSKRDTRA 390
YN L +P+ SV SF + S ++ P++R++++ GSV + + RA
Sbjct: 443 YNELGSLPSPNSV--SFTEDSRPNVNTPSRRQQIQEEFGSVLQMENRA 488
>SPBP23A10.09 |||GINS complex subunit Psf1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 202
Score = 24.6 bits (51), Expect = 5.7
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 29 VRL*NLEKWCWSSAAGTHAVKPLS*RITTRAHLTNHTDMLSS 154
+RL L ++CWS + S R +LT ++++L++
Sbjct: 94 LRLQRLRQYCWSGGKRMESCLDTSLSTYERDYLTRYSELLAA 135
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 24.6 bits (51), Expect = 5.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 295 FEKFSAKDLKDPAKRKKLRLTQGSVSKRDTRAER 396
FEK S+ ++ + ++K + + +SKR RAE+
Sbjct: 591 FEKLSSGEINEEEEKKIYKKLKKDLSKRLERAEK 624
>SPAC1805.13 |rpl14||60S ribosomal protein L14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 134
Score = 24.2 bits (50), Expect = 7.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 31 KIMKPGKVVLVLSGRYARRKAIVVKNYD 114
+ ++ G+VVLV G Y + A++V D
Sbjct: 6 RYVEVGRVVLVTKGEYTGKLAVIVDIVD 33
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 57 AGPQRPVRTP*SHCRKELRR 116
A PQR +TP +H +EL++
Sbjct: 36 ANPQRKAKTPSNHATEELQQ 55
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 24.2 bits (50), Expect = 7.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 380 SLFETDPCVKRSFLRLAGSFRSFALNFSKLKSTE*RVGIR 261
SL+ET + + GS +SFA +L + RVG R
Sbjct: 36 SLYETQNDGSKKLSSIDGSIKSFAACLHELNRLKSRVGDR 75
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 24.2 bits (50), Expect = 7.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 160 IDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNY 255
ID+ +K K K K +KR IKP G Y
Sbjct: 434 IDKKKKKKKKNNKKKKKNKRKNIKPGPLGPAY 465
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 24.2 bits (50), Expect = 7.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 7 GEYPSKMGKIMKPGKVVLVLSGRYAR 84
G +PS G+ ++ KV+++ G +AR
Sbjct: 225 GRHPSDNGEKIRNKKVIIIQGGSHAR 250
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 23.8 bits (49), Expect = 10.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 280 SVDFSFEKFSAKDLKDPAKRKKLRLTQ 360
++D+ EK KD+ K+K LRL Q
Sbjct: 197 NIDYKKEKTVNKDVGGALKKKALRLRQ 223
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 23.8 bits (49), Expect = 10.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 171 VSVDAG-DESMSVWFVRCALVVILYDNGFTACVPAA 67
V++D G D+ + +W + C L V+L TA +P A
Sbjct: 346 VNLDGGYDDKVDIWSLGCVLYVML-----TASIPFA 376
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 23.8 bits (49), Expect = 10.0
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 70 GRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPR 177
G R+KAI D G+ DK YG V R P+
Sbjct: 367 GEKLRKKAIKRALKDRGSQDKAYG-GVVQSNSRQPK 401
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,757,015
Number of Sequences: 5004
Number of extensions: 35386
Number of successful extensions: 98
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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