Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K16
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27 pro... 158 7e-39
L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27 pro... 158 7e-39
BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27 p... 158 7e-39
BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein. 137 1e-32
U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27 pro... 30 3.3
AK001513-1|BAA91733.1| 566|Homo sapiens protein ( Homo sapiens ... 29 5.7
AB037835-1|BAA92652.1| 1586|Homo sapiens KIAA1414 protein protein. 29 5.7
BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein. 29 7.5
BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein. 29 7.5
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 29 7.5
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 29 7.5
AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein. 29 7.5
>L19527-1|AAA19815.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>L05094-1|AAC15857.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC098560-1|AAH98560.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC010026-1|AAH10026.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC007273-1|AAH07273.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC002588-1|AAH02588.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC001700-1|AAH01700.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>AB061851-1|BAB79492.1| 136|Homo sapiens ribosomal protein L27
protein.
Length = 136
Score = 158 bits (383), Expect = 7e-39
Identities = 77/111 (69%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +1
Query: 25 MGKIMKPGKVVLVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 204
MGK MKPGKVVLVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 205 KIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
KI KRSKIK FVK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 111
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 104 PALKRKARREAKVKFEERYKTGKN 127
>BC021886-1|AAH21886.1| 140|Homo sapiens RPL27 protein protein.
Length = 140
Score = 137 bits (331), Expect = 1e-32
Identities = 67/100 (67%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
Frame = +1
Query: 58 LVLSGRYARRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 237
LVL+GRY+ RKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK F
Sbjct: 16 LVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSF 75
Query: 238 VKGVNYNHLMPTRYSVDFSFEKFSA-KDL-KDPAKRKKLR 351
VK NYNHLMPTRYSVD +K KD+ +DPA ++K R
Sbjct: 76 VKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKAR 115
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 108 PALKRKARREAKVKFEERYKTGKN 131
>U25752-1|AAA93226.1| 40|Homo sapiens ribosomal protein L27
protein.
Length = 40
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 327 PS*AQEAAFNTRVRFEERYKSGKN 398
P+ ++A +V+FEERYK+GKN
Sbjct: 8 PALKRKARREAKVKFEERYKTGKN 31
>AK001513-1|BAA91733.1| 566|Homo sapiens protein ( Homo sapiens
cDNA FLJ10651 fis, clone NT2RP2005868. ).
Length = 566
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 108 ILYDNGFTACVPAAEDQHHFSRFHNLTHLGWIFP 7
+L +N F + A++D H F+ NL H+G ++P
Sbjct: 481 LLDENSFASASSASKDLHEFA-LQNLMHIGPLYP 513
>AB037835-1|BAA92652.1| 1586|Homo sapiens KIAA1414 protein protein.
Length = 1586
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 108 ILYDNGFTACVPAAEDQHHFSRFHNLTHLGWIFP 7
+L +N F + A++D H F+ NL H+G ++P
Sbjct: 1501 LLDENSFASASSASKDLHEFA-LQNLMHIGPLYP 1533
>BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein.
Length = 332
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 115 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 237
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 73 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 110
>BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein.
Length = 323
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 115 EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPF 237
+G SD+PY A +DR P K ++ KN +H + K F
Sbjct: 64 KGASDQPY---LWARLDRKPNKQAEKRFKNFLHSKENPKEF 101
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 148 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 327
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 148 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 327
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 135 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 193
>AB037842-1|BAA92659.1| 1463|Homo sapiens KIAA1421 protein protein.
Length = 1463
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 148 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDFSFEKFSAKDLKD 327
F+ G++ + K K K K HK+ KPF KG++ + P D EK + + +K+
Sbjct: 159 FIYGLENFVYKDIKPGRKRKKHKKHFKKPF-KGLDRSKDKPKEAKKDTFVEKLATQVIKN 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,027,754
Number of Sequences: 237096
Number of extensions: 1208856
Number of successful extensions: 2448
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2442
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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