Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K15
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 27 3.1
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 27 3.1
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 27 3.1
Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical pr... 27 4.1
U40060-8|AAA81146.1| 218|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine r... 27 5.4
U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical pr... 26 7.2
U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine r... 26 7.2
U64857-17|AAC25865.1| 161|Caenorhabditis elegans Hypothetical p... 26 9.5
AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical... 26 9.5
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 26 9.5
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 26 9.5
AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine re... 26 9.5
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 34 GIFYSRFQHLSQRVFHSMIIVFIYIHNSIFNLL 132
G+ S F HL H +I FIY + F LL
Sbjct: 1109 GVLSSCFSHLESHSAHKLIFDFIYYVYNAFGLL 1141
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 34 GIFYSRFQHLSQRVFHSMIIVFIYIHNSIFNLL 132
G+ S F HL H +I FIY + F LL
Sbjct: 1109 GVLSSCFSHLESHSAHKLIFDFIYYVYNAFGLL 1141
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.5 bits (58), Expect = 3.1
Identities = 7/32 (21%), Positives = 22/32 (68%)
Frame = +2
Query: 95 FLFIYTIAFLIYFFLLPTHTFHEGLQYFFYNN 190
F+F++++ +L+ +++ TF++ L+++ N
Sbjct: 182 FIFLFSVGYLVLLYVINLLTFYQILKFYLRKN 213
>Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical
protein T07C12.1 protein.
Length = 324
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 351 LMIYLITTRKTHNRHNINFLLLFY 280
+ +YLI T K++ N FLLLF+
Sbjct: 24 IFLYLIFTEKSNRYGNYRFLLLFF 47
>U40060-8|AAA81146.1| 218|Caenorhabditis elegans Hypothetical
protein F38B6.2 protein.
Length = 218
Score = 27.1 bits (57), Expect = 4.1
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -2
Query: 227 ITVFIAIYILISGYCKKNI 171
I +FI+++I+ SGYC+ +I
Sbjct: 4 ILIFISVFIIESGYCQPSI 22
>Z71265-5|CAA95836.1| 481|Caenorhabditis elegans Hypothetical
protein M05B5.6 protein.
Length = 481
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 95 FLFIYTIAFLIYFFLLPTHTFHEGL 169
F ++ +AFL++F LL H F L
Sbjct: 92 FYSLHILAFLVFFLLLAWHVFSRNL 116
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 29 VRVYFIHAFNTCHSGYSIP**LFLFIYTIAFLIYF--FLLP 145
+ +YF+ N HS +SI +F TI ++F FL+P
Sbjct: 60 ITMYFVLFLNILHSNWSINILYSVFSLTIVLYLFFCKFLIP 100
>AF022980-14|AAG24190.1| 332|Caenorhabditis elegans Serpentine
receptor, class j protein57 protein.
Length = 332
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 351 LMIYLITTRKTHNRHNINFLLLFY 280
+ +YLI T K+ N N FLLL++
Sbjct: 24 VFVYLIFTEKSANFGNYRFLLLYF 47
>U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical
protein F31F7.1c protein.
Length = 273
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 79 GIPAVTSVESVNKIYPDV 26
GIPA+ S S+ IYPDV
Sbjct: 250 GIPAILSFSSLITIYPDV 267
>U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical
protein F31F7.1a protein.
Length = 316
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 79 GIPAVTSVESVNKIYPDV 26
GIPA+ S S+ IYPDV
Sbjct: 250 GIPAILSFSSLITIYPDV 267
>AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein49 protein.
Length = 330
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 351 LMIYLITTRKTHNRHNINFLLLFY 280
+ IYLI T K+ N FLLLF+
Sbjct: 24 VFIYLIFTEKSSQFGNYRFLLLFF 47
>U64857-17|AAC25865.1| 161|Caenorhabditis elegans Hypothetical
protein C37C3.11 protein.
Length = 161
Score = 25.8 bits (54), Expect = 9.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 104 IYTIAFLIYFFLLPTHTFHEGLQYF 178
++ + ++ FFL +H+ EGL YF
Sbjct: 104 LFGVLYVPLFFLQTSHSLMEGLDYF 128
>AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical
protein Y113G7B.16 protein.
Length = 489
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 219 IHSYIYIDIWLL*KKYCSPSWNVWVGNKKK*IKNAIV 109
IHS +D WL+ +++C+ W V ++ IK+AI+
Sbjct: 9 IHSSKLLD-WLVSRRHCNKDWQKSVVAIREKIKHAIL 44
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 95 FLFIYTIAFLIYFFLLPTHTFHEGLQYFF 181
F +YTI FLI F +L H HE + F+
Sbjct: 1048 FFLLYTIGFLISFGVLQGH-IHEIVVIFY 1075
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/20 (50%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = +1
Query: 97 FIYIHN-SIFNLLFFVTYPH 153
FIY+ + S+F +L+ VTYP+
Sbjct: 360 FIYLFSISLFTMLYIVTYPY 379
>AC006767-1|AAF60573.2| 332|Caenorhabditis elegans Serpentine
receptor, class j protein55 protein.
Length = 332
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 351 LMIYLITTRKTHNRHNINFLLLFY 280
+ IYLI T K+ N N +LLL++
Sbjct: 24 VFIYLIFTEKSTNFGNYRYLLLYF 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,406,799
Number of Sequences: 27780
Number of extensions: 129266
Number of successful extensions: 313
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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