Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K14
(407 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 119 8e-28
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 119 8e-28
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 119 8e-28
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 112 9e-26
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 112 9e-26
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 75 6e-18
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 78 2e-15
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 60 9e-10
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 60 9e-10
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 60 9e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 9e-10
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 60 9e-10
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 60 9e-10
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 59 2e-09
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 59 2e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 1e-08
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 35 0.022
SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 119 bits (287), Expect = 8e-28
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 174
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 119 bits (287), Expect = 8e-28
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 174
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 316 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 370
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 119 bits (287), Expect = 8e-28
Identities = 55/55 (100%), Positives = 55/55 (100%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 174
STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 371 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 112 bits (270), Expect = 9e-26
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 174
+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 136 NTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 190
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 112 bits (270), Expect = 9e-26
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 174
+TAIQELFKR+ EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM+DL++EYQQY
Sbjct: 198 NTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQY 252
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 74.5 bits (175), Expect(2) = 6e-18
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 141
STAIQE F+R +EQF AMFRR+AFLHWYT EGMD +EFTE + N
Sbjct: 190 STAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
Score = 32.7 bits (71), Expect(2) = 6e-18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 121 FTEAESNMNDLVSEYQQY 174
+ A+SN+NDL+SEYQQY
Sbjct: 256 YFSADSNLNDLISEYQQY 273
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAIQELFKRI + MFRR+AFLHWYT EGMD +F EA++++ DL+S YQQ
Sbjct: 276 NTAIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 365 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 418
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 533 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 586
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 318 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 371
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 752 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 1161 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1214
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 366 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 419
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 797 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 850
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 346 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 399
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 814 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 867
Score = 59.3 bits (137), Expect = 1e-09
Identities = 22/54 (40%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TA+ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 TTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 966 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 1019
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 306 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 359
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 179 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 58.8 bits (136), Expect = 2e-09
Identities = 22/54 (40%), Positives = 39/54 (72%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 179 TTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 58.8 bits (136), Expect = 2e-09
Identities = 22/54 (40%), Positives = 39/54 (72%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+TAI + + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 79 TTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 132
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.6 bits (128), Expect = 1e-08
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 19 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 347
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +1
Query: 64 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 171
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 13 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 48
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 35.1 bits (77), Expect = 0.022
Identities = 14/53 (26%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +1
Query: 10 STAIQELFKRISEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEY 165
++ I+ F + ++F +++RKA +H YT +G++ +F + +++ L+ EY
Sbjct: 418 NSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_25840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 768
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 7 GSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 162
G +Q+ + +SE A KAF YTG D++E T N +DL++E
Sbjct: 716 GMDGLQKSAQLLSELKRAATLNKAFRLSYTGPDEDDLESTMLH-NTSDLLNE 766
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,939,747
Number of Sequences: 59808
Number of extensions: 126654
Number of successful extensions: 361
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 740151420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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