Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K13
(213 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q05048 Cluster: Cleavage stimulation factor 50 kDa subu... 75 3e-13
UniRef50_Q0DNG5 Cluster: Os03g0754900 protein; n=13; Poaceae|Rep... 43 0.001
UniRef50_Q8L4J2 Cluster: Cleavage stimulation factor 50K chain; ... 43 0.002
UniRef50_Q54XS9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.18
UniRef50_Q5AXM0 Cluster: Putative uncharacterized protein; n=1; ... 33 0.96
UniRef50_A4RDM6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.3
UniRef50_UPI0000E4784B Cluster: PREDICTED: similar to RFWD3 prot... 33 1.7
UniRef50_Q2U9S0 Cluster: Predicted NTPase; n=4; Pezizomycotina|R... 32 2.9
UniRef50_UPI0000499162 Cluster: Beige protein; n=1; Entamoeba hi... 31 3.9
UniRef50_Q3W9P2 Cluster: G-protein beta WD-40 repeat; n=1; Frank... 31 3.9
UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1; ... 31 3.9
UniRef50_Q0UUZ3 Cluster: Putative uncharacterized protein; n=1; ... 31 3.9
UniRef50_Q229Z6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_UPI00006CB709 Cluster: hypothetical protein TTHERM_0049... 31 6.7
UniRef50_A4YEA4 Cluster: HAD-superfamily hydrolase, subfamily IA... 31 6.7
UniRef50_Q4E637 Cluster: Putative uncharacterized protein; n=2; ... 30 8.9
>UniRef50_Q05048 Cluster: Cleavage stimulation factor 50 kDa
subunit; n=46; Eumetazoa|Rep: Cleavage stimulation
factor 50 kDa subunit - Homo sapiens (Human)
Length = 431
Score = 74.9 bits (176), Expect = 3e-13
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.24
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>UniRef50_Q0DNG5 Cluster: Os03g0754900 protein; n=13; Poaceae|Rep:
Os03g0754900 protein - Oryza sativa subsp. japonica
(Rice)
Length = 470
Score = 43.2 bits (97), Expect = 0.001
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 56 SRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
S DE + + W + +A + GH GA R++ HS PAF+TC +D
Sbjct: 412 STDEQNSEVVVWDALTAENVARLPSGHTGAPRWLGHSPAEPAFVTCGND 460
>UniRef50_Q8L4J2 Cluster: Cleavage stimulation factor 50K chain;
n=3; Arabidopsis thaliana|Rep: Cleavage stimulation
factor 50K chain - Arabidopsis thaliana (Mouse-ear
cress)
Length = 429
Score = 42.7 bits (96), Expect = 0.002
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 56 SRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
S DEA+ + TW +R+A + HNGA R+I HS F+TC D
Sbjct: 371 SIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGID 419
>UniRef50_Q54XS9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 506
Score = 35.9 bits (79), Expect = 0.18
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 56 SRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYR 208
+ DE + ++SR+ + Q ++ GHN VR+I S A +TCS D+R
Sbjct: 427 TNDEQPSVAVVYNSRTKEQVQKLT-GHNNTVRYIAASPVENALMTCSLDHR 476
>UniRef50_Q5AXM0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1878
Score = 33.5 bits (73), Expect = 0.96
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 5 EALSSSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAF 184
+ ++S P RL + + D+ T + WH+ + S + + GHN VR +V S
Sbjct: 432 DCVNSVSFSPDSRLLASASDDRTVKI--WHAATGSLQRTLE-GHNDWVRSVVFSHDSRLI 488
Query: 185 LTCSDD 202
+ SDD
Sbjct: 489 ASASDD 494
>UniRef50_A4RDM6 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1595
Score = 33.1 bits (72), Expect = 1.3
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 5 EALSSSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGA 145
+A S I GR+ SR ATTS T SRS +R QL + G + +
Sbjct: 1071 KAPSEGHISTRGRINETSRPPATTSRWTSKSRSRARAQLGATGFSSS 1117
>UniRef50_UPI0000E4784B Cluster: PREDICTED: similar to RFWD3
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RFWD3 protein,
partial - Strongylocentrotus purpuratus
Length = 1329
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLG 133
Q +L +C+ DEAT+S+ TW + S + Q +S+G
Sbjct: 659 QDDDKLIACAGDEATSSVFTWDASSGNLTQKMSIG 693
>UniRef50_Q2U9S0 Cluster: Predicted NTPase; n=4; Pezizomycotina|Rep:
Predicted NTPase - Aspergillus oryzae
Length = 371
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 5 EALSSSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAF 184
+ ++S P GRL + D+ T L W + + Q + GH V F+ S G
Sbjct: 206 DPVNSMVFSPDGRLLASGSDDDTVRL--WDPATGALQQTLE-GHTDPVEFVTFSPDGRLL 262
Query: 185 LTCSDD 202
+CS D
Sbjct: 263 ASCSSD 268
>UniRef50_UPI0000499162 Cluster: Beige protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: Beige protein - Entamoeba
histolytica HM-1:IMSS
Length = 2653
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 156 MNRTAPLCPREIS--WHRLALLECQVQRDVVASSREQERNLPCG*ISLE 16
+N P C I + LAL+ CQV D+V+ S EQ + +P +S++
Sbjct: 1352 INFQLPRCTESIDVVYVLLALITCQVVPDIVSDSFEQYQKMPFSTVSIQ 1400
>UniRef50_Q3W9P2 Cluster: G-protein beta WD-40 repeat; n=1; Frankia
sp. EAN1pec|Rep: G-protein beta WD-40 repeat - Frankia
sp. EAN1pec
Length = 958
Score = 31.5 bits (68), Expect = 3.9
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +2
Query: 26 IQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDY 205
+ P GRL + T ++ + + R GH G V + S G F T DD+
Sbjct: 349 LSPDGRLLAIVETATTDNVVRLWNLATHRVAATVTGHRGKVNAVAFSPDGRLFATAGDDH 408
Query: 206 RA 211
A
Sbjct: 409 TA 410
>UniRef50_Q54HF5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 595
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 89 WHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
W + RC +GH+ AVR I S G FL+C D
Sbjct: 332 WDAYGDRRCIQTYMGHSQAVRDICFSNDGRRFLSCGYD 369
>UniRef50_Q0UUZ3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1780
Score = 31.5 bits (68), Expect = 3.9
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 196 AARQESRTCSRMYYESNCSVVSQRNQLASTSASRVPSTKRRRCLIAGTRT*SSVWLNIA 20
AA E+R S Y S VV Q ++ A P +R+ +AG S VW ++A
Sbjct: 1474 AAPAENRLSSGYYTNSTQDVVPQNVDMSRNLAPPPPQDRRQSMDVAGAAARSPVWNSVA 1532
>UniRef50_Q229Z6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 634
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 32 PHGR-LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
P G + SC +D + W + S+C +I H GA+R + S G L+ SDD
Sbjct: 99 PDGETIASCGQDR---QIRLWQNTVQSKCSIIK-AHCGAIRSMSFSADGGYLLSSSDD 152
>UniRef50_UPI00006CB709 Cluster: hypothetical protein
TTHERM_00494570; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00494570 - Tetrahymena
thermophila SB210
Length = 609
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 74 TSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
T++ W +C +GH AVR I + G FL+CS D
Sbjct: 340 TTVKLWDVMGNKKCVRTYMGHKQAVRDIEFTNDGRHFLSCSYD 382
>UniRef50_A4YEA4 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=1; Metallosphaera sedula DSM 5348|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 1 -
Metallosphaera sedula DSM 5348
Length = 207
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 185 GKPDLFQNVL*IELLRCVPEKSVGI 111
GKPD F VL ++ LR +PE SVG+
Sbjct: 131 GKPDPFPVVLALQRLRALPEVSVGV 155
>UniRef50_Q4E637 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1005
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 5 EALSSSDIQPHGRLRSCSRDEATTSLCTWH 94
EAL +S PH R CSR ++LC W+
Sbjct: 96 EALVASTSLPHYRRSRCSRQRWESALCVWN 125
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,733,711
Number of Sequences: 1657284
Number of extensions: 3455181
Number of successful extensions: 10487
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10482
length of database: 575,637,011
effective HSP length: 49
effective length of database: 494,430,095
effective search space used: 10383031995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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