Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_K13
(213 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L02547-1|AAA35691.1| 431|Homo sapiens cleavage stimulation fact... 75 4e-14
BT007138-1|AAP35802.1| 431|Homo sapiens cleavage stimulation fa... 75 4e-14
BC007425-1|AAH07425.1| 431|Homo sapiens cleavage stimulation fa... 75 4e-14
BC001011-1|AAH01011.1| 431|Homo sapiens cleavage stimulation fa... 75 4e-14
AL121914-12|CAI19328.1| 431|Homo sapiens cleavage stimulation f... 75 4e-14
BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40 ... 29 2.1
BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40 ... 29 2.1
BC037539-1|AAH37539.1| 956|Homo sapiens angiomotin like 1 protein. 29 2.1
AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40 ... 29 2.1
AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40 ... 29 2.1
AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40 ... 29 2.1
AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing facto... 29 2.1
AK093699-1|BAC04218.1| 543|Homo sapiens protein ( Homo sapiens ... 29 2.1
AK074084-1|BAB84910.1| 612|Homo sapiens FLJ00155 protein protein. 29 2.1
AF453742-1|AAL49764.1| 557|Homo sapiens angiomotin like 1 protein. 29 2.1
AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17 ... 29 2.1
AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing facto... 29 2.1
AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing facto... 29 2.1
M16538-1|AAA35922.1| 340|Homo sapiens protein ( Human signal-tr... 29 3.6
L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencepha... 29 3.6
BT009812-1|AAP88814.1| 244|Homo sapiens transcription factor-li... 29 3.6
BC142982-1|AAI42983.1| 112|Homo sapiens WDR27 protein protein. 29 3.6
BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein. 29 3.6
BC010689-1|AAH10689.1| 244|Homo sapiens MAX-like protein X prot... 29 3.6
AK000150-1|BAA90977.1| 244|Homo sapiens protein ( Homo sapiens ... 29 3.6
AF213668-1|AAG40147.1| 298|Homo sapiens bHLHZip transcription f... 29 3.6
AF213667-1|AAG40146.1| 244|Homo sapiens bHLHZip transcription f... 29 3.6
AF203978-1|AAF14638.1| 244|Homo sapiens MAX-like bHLHZIP protei... 29 3.6
BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase act... 28 4.7
AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease acti... 28 4.7
AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease acti... 28 4.7
AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease acti... 28 4.7
AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease acti... 28 4.7
AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein. 28 4.7
U72342-1|AAC51111.1| 410|Homo sapiens platelet activating facto... 28 6.3
M36429-1|AAA63264.1| 340|Homo sapiens protein ( Human transduci... 28 6.3
M16514-1|AAA03179.1| 340|Homo sapiens GNB2 protein. 28 6.3
L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencepha... 28 6.3
L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencepha... 28 6.3
D87062-1|BAB46918.1| 166|Homo sapiens cerebral protein-3 protein. 28 6.3
CR541729-1|CAG46530.1| 340|Homo sapiens GNB2 protein. 28 6.3
BC068003-1|AAH68003.1| 340|Homo sapiens guanine nucleotide bind... 28 6.3
BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating fac... 28 6.3
BC012348-1|AAH12348.1| 340|Homo sapiens guanine nucleotide bind... 28 6.3
BC010073-1|AAH10073.1| 340|Homo sapiens guanine nucleotide bind... 28 6.3
AF501883-1|AAM15919.1| 340|Homo sapiens guanine nucleotide bind... 28 6.3
AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating fac... 28 6.3
AF208838-1|AAL34973.1| 410|Homo sapiens Miller-Dieker lissencep... 28 6.3
AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker lissencep... 28 6.3
AF053356-4|AAC78794.1| 340|Homo sapiens GNB2 protein. 28 6.3
AL590097-1|CAH70192.1| 248|Homo sapiens 5-hydroxytryptamine (se... 27 8.3
AL355812-1|CAI41334.1| 248|Homo sapiens 5-hydroxytryptamine (se... 27 8.3
>L02547-1|AAA35691.1| 431|Homo sapiens cleavage stimulation factor
protein.
Length = 431
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>BT007138-1|AAP35802.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>BC007425-1|AAH07425.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>BC001011-1|AAH01011.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>AL121914-12|CAI19328.1| 431|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 1, 50kDa protein.
Length = 431
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +2
Query: 62 DEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDDYRA 211
DE T SLC W SR+A R L+SLGHN VR IVHS T P F+TCSDD+RA
Sbjct: 372 DERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFRA 421
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 9 HLAQAIFNHTEDYVLVPAMR 68
H QA+FNHTEDYVL+P R
Sbjct: 355 HRTQAVFNHTEDYVLLPDER 374
>BC126114-1|AAI26115.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>BC117145-1|AAI17146.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>BC037539-1|AAH37539.1| 956|Homo sapiens angiomotin like 1 protein.
Length = 956
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 59 RDEATTSLCTWHSRSAS-RCQLISLGHNGAVRFIVHSGTGPAF 184
+DEA L H RS S R +SL NGA + + SG G F
Sbjct: 246 KDEALKELKQGHVRSLSERIMQLSLERNGAKQHLPGSGNGKGF 288
>AL671518-2|CAI13322.1| 579|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>AL671518-1|CAI13321.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>AL445068-1|CAI22519.1| 539|Homo sapiens cell division cycle 40
homolog (S. cerevisiae) protein.
Length = 539
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>AK222721-1|BAD96441.1| 579|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSEAVRDICFNTAGTQFLSAAYD 353
>AK093699-1|BAC04218.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ36380 fis, clone THYMU2008383. ).
Length = 543
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 59 RDEATTSLCTWHSRSAS-RCQLISLGHNGAVRFIVHSGTGPAF 184
+DEA L H RS S R +SL NGA + + SG G F
Sbjct: 246 KDEALKELKQGHVRSLSERIMQLSLERNGAKQHLPGSGNGKGF 288
>AK074084-1|BAB84910.1| 612|Homo sapiens FLJ00155 protein protein.
Length = 612
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 59 RDEATTSLCTWHSRSAS-RCQLISLGHNGAVRFIVHSGTGPAF 184
+DEA L H RS S R +SL NGA + + SG G F
Sbjct: 252 KDEALKELKQGHVRSLSERIMQLSLERNGAKQHLPGSGNGKGF 294
>AF453742-1|AAL49764.1| 557|Homo sapiens angiomotin like 1 protein.
Length = 557
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 59 RDEATTSLCTWHSRSAS-RCQLISLGHNGAVRFIVHSGTGPAF 184
+DEA L H RS S R +SL NGA + + SG G F
Sbjct: 246 KDEALKELKQGHVRSLSERIMQLSLERNGAKQHLPGSGNGKGF 288
>AF061241-1|AAC25166.1| 542|Homo sapiens splicing factor hPRP17
protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 267 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 316
>AF038392-1|AAC39730.1| 579|Homo sapiens pre-mRNA splicing factor
protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 304 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 353
>AB208903-1|BAD92140.1| 501|Homo sapiens pre-mRNA splicing factor
17 variant protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 44 LRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
L SCS D + W RC +GH+ AVR I + G FL+ + D
Sbjct: 303 LLSCSMD---CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYD 352
>M16538-1|AAA35922.1| 340|Homo sapiens protein ( Human
signal-transducing guanine nucleotide-binding regulatory
(G) protein beta subunit mRNA, complete cds. ).
Length = 340
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P+GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPNGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>L13387-1|AAA02882.1| 288|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 288
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 184 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTXVGHDNWVRGVLFHSGGKFILSCADD 237
>BT009812-1|AAP88814.1| 244|Homo sapiens transcription factor-like
4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 37 SVVSRANSIGSTSASSVPNT 56
>BC142982-1|AAI42983.1| 112|Homo sapiens WDR27 protein protein.
Length = 112
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 14 SSSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTC 193
S S +Q ++ C+ T LC W+++ S LI GH+ + + L C
Sbjct: 30 SVSHVQLACSMQDCAFPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLIC 89
Query: 194 S 196
S
Sbjct: 90 S 90
>BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein.
Length = 730
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 14 SSSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTC 193
S S +Q ++ C+ T LC W+++ S LI GH+ + + L C
Sbjct: 30 SVSHVQLACSMQDCAFPLDGTELCIWNTKDPSHQLLILRGHHQPITAMAFGNKVNPLLIC 89
Query: 194 S 196
S
Sbjct: 90 S 90
>BC010689-1|AAH10689.1| 244|Homo sapiens MAX-like protein X
protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 37 SVVSRANSIGSTSASSVPNT 56
>AK000150-1|BAA90977.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ20143 fis, clone COL07782. ).
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 37 SVVSRANSIGSTSASSVPNT 56
>AF213668-1|AAG40147.1| 298|Homo sapiens bHLHZip transcription
factor BIGMAX gamma protein.
Length = 298
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 91 SVVSRANSIGSTSASSVPNT 110
>AF213667-1|AAG40146.1| 244|Homo sapiens bHLHZip transcription
factor BIGMAX beta protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 37 SVVSRANSIGSTSASSVPNT 56
>AF203978-1|AAF14638.1| 244|Homo sapiens MAX-like bHLHZIP protein
protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 142 SVVSQRNQLASTSASRVPST 83
SVVS+ N + STSAS VP+T
Sbjct: 37 SVVSRANSIGSTSASSVPNT 56
>BC150255-1|AAI50256.1| 1237|Homo sapiens apoptotic peptidase
activating factor 1 protein.
Length = 1237
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 829 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 884
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 885 SFLTSSDD 892
>AJ243048-1|CAB55588.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 840 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 895
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 896 SFLTSSDD 903
>AJ243009-1|CAB55585.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 840 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 895
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 896 SFLTSSDD 903
>AF149794-1|AAD34016.1| 1248|Homo sapiens apoptotic protease
activating factor 1 protein.
Length = 1248
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 840 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 895
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 896 SFLTSSDD 903
>AF134397-1|AAD38344.1| 1237|Homo sapiens apoptotic protease
activating factor-1 long isoform APAF-1L protein.
Length = 1237
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 829 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 884
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 885 SFLTSSDD 892
>AB007873-1|BAA24843.2| 1237|Homo sapiens KIAA0413 protein.
Length = 1237
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 2 HEALSSSDIQPHGRLRSCSRDEATTSLCTWHSRS-ASRCQLISLGHNGAVRFIVHSGTGP 178
H + D P L + + L SRS + C+ GH V ++ S G
Sbjct: 829 HSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCR----GHLSWVHGVMFSPDGS 884
Query: 179 AFLTCSDD 202
+FLT SDD
Sbjct: 885 SFLTSSDD 892
>U72342-1|AAC51111.1| 410|Homo sapiens platelet activating factor
acetylhydrolase, brain isoform, 45 kDa subunit protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>M36429-1|AAA63264.1| 340|Homo sapiens protein ( Human transducin
beta-2 subunit mRNA, complete cds. ).
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>M16514-1|AAA03179.1| 340|Homo sapiens GNB2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>L13386-1|AAA02881.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>L13385-1|AAA02880.1| 410|Homo sapiens Miller-Dieker lissencephaly
protein protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>D87062-1|BAB46918.1| 166|Homo sapiens cerebral protein-3 protein.
Length = 166
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +2
Query: 8 ALSSSDIQPHGRLRSCSRDEATTSLCTWHSRSASR-CQLISLGH---NGAVRFIVHSGTG 175
+L SS P +SC SL TW R R C++ S+ H G + HS TG
Sbjct: 2 SLHSSPTLPTSLYQSCDLSVGGPSLLTWVWRRERRCCKVFSVSHCLEAGPAKAWAHSCTG 61
>CR541729-1|CAG46530.1| 340|Homo sapiens GNB2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>BC068003-1|AAH68003.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>BC064638-1|AAH64638.1| 410|Homo sapiens platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit 45kDa
protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>BC012348-1|AAH12348.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>BC010073-1|AAH10073.1| 340|Homo sapiens guanine nucleotide binding
protein (G protein), beta polypeptide 2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>AF501883-1|AAM15919.1| 340|Homo sapiens guanine nucleotide binding
protein beta 2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>AF400434-1|AAK92483.1| 410|Homo sapiens platelet-activating factor
acetyl hydrolase isoform Ib alpha subunit protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>AF208838-1|AAL34973.1| 410|Homo sapiens Miller-Dieker
lissencephaly protein protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>AF208837-1|AAL34972.1| 410|Homo sapiens Miller-Dieker
lissencephaly protein protein.
Length = 410
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 29 QPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCSDD 202
+P L S SRD+ ++ W S C + +GH+ VR ++ G L+C+DD
Sbjct: 306 KPGPFLLSGSRDK---TIKMWDV-STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD 359
>AF053356-4|AAC78794.1| 340|Homo sapiens GNB2 protein.
Length = 340
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 17 SSDIQPHGRLRSCSRDEATTSLCTWHSRSASRCQLISLGHNGAVRFIVHSGTGPAFLTCS 196
S + P GR +A+ L W R S C+ +GH + + G AF T S
Sbjct: 189 SLSLAPDGRTFVSGACDASIKL--WDVRD-SMCRQTFIGHESDINAVAFFPNGYAFTTGS 245
Query: 197 DD 202
DD
Sbjct: 246 DD 247
>AL590097-1|CAH70192.1| 248|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2C protein.
Length = 248
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 109 SMPTDFSGTQRSSSIHSTFWNRSGFPDVQRRLQG 210
S PT F T R T W +SGFP+V + G
Sbjct: 209 SAPTSFDVTARPH--RGTAWTKSGFPEVLQEEYG 240
>AL355812-1|CAI41334.1| 248|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 2C protein.
Length = 248
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 109 SMPTDFSGTQRSSSIHSTFWNRSGFPDVQRRLQG 210
S PT F T R T W +SGFP+V + G
Sbjct: 209 SAPTSFDVTARPH--RGTAWTKSGFPEVLQEEYG 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,351,722
Number of Sequences: 237096
Number of extensions: 513823
Number of successful extensions: 1417
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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